Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026938824.2 |
| length | 1180 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 7 |
| gene id | aimp1a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 6824909 ~ 6844491 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0000049 | tRNA binding | molecular_function |
| GO:0004825 | methionine-tRNA ligase activity | molecular_function |
| id | description |
|---|---|
| K15437 | AIMP1, ARC1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU49467 | lncRNA | downstream | 27289 | 6794579 ~ 6797620 (-) | True | G41809 |
| TU49415 | lncRNA | downstream | 144636 | 6677130 ~ 6680273 (-) | True | G41768 |
| TU49367 | lncRNA | downstream | 286359 | 6535704 ~ 6538550 (-) | True | G41731 |
| TU49177 | lncRNA | downstream | 453043 | 6371655 ~ 6371866 (-) | True | G41563 |
| TU49084 | lncRNA | downstream | 522821 | 6295232 ~ 6302088 (-) | True | G41491 |
| TU49606 | lncRNA | upstream | 96749 | 6941240 ~ 6941458 (-) | True | G41938 |
| TU49614 | lncRNA | upstream | 167602 | 7012093 ~ 7012306 (-) | True | G41944 |
| TU49679 | lncRNA | upstream | 172274 | 7016765 ~ 7017405 (-) | True | G42008 |
| XR_004577839.1 | lncRNA | upstream | 296608 | 7141099 ~ 7142302 (-) | True | LOC117596848 |
| TU49878 | lncRNA | upstream | 469177 | 7313668 ~ 7315596 (-) | True | G42173 |
| XM_026932741.2 | mRNA | downstream | 108646 | 6700324 ~ 6716263 (-) | True | pkd2 |
| XM_034302018.1 | mRNA | downstream | 108647 | 6700324 ~ 6716262 (-) | False | pkd2 |
| XM_026932732.2 | mRNA | downstream | 109234 | 6700324 ~ 6715675 (-) | False | pkd2 |
| XM_034302955.1 | mRNA | downstream | 164918 | 6643933 ~ 6659991 (-) | False | LOC117596878 |
| XM_034302954.1 | mRNA | downstream | 164918 | 6643933 ~ 6659991 (-) | True | LOC117596878 |
| XM_026938804.2 | mRNA | upstream | 98206 | 6942697 ~ 7006034 (-) | False | npnta |
| XM_026938779.2 | mRNA | upstream | 98206 | 6942697 ~ 7006034 (-) | False | npnta |
| XM_026938811.2 | mRNA | upstream | 98206 | 6942697 ~ 7006034 (-) | False | npnta |
| XM_026938787.2 | mRNA | upstream | 98206 | 6942697 ~ 7006034 (-) | False | npnta |
| XM_034302826.1 | mRNA | upstream | 98206 | 6942697 ~ 7006034 (-) | False | npnta |
| XR_004577821.1 | other | downstream | 1005396 | 5756711 ~ 5819513 (-) | False | gab1 |
| TU48529 | other | downstream | 1596986 | 5203706 ~ 5227923 (-) | False | lsm6 |
| TU48528 | other | downstream | 1596986 | 5225030 ~ 5227923 (-) | False | lsm6 |
| XR_004577883.1 | other | downstream | 2215459 | 4545584 ~ 4609450 (-) | False | dclk2a |
| trnah-gug_3 | other | downstream | 3790356 | 3034482 ~ 3034553 (-) | True | trnah-gug_3 |
| XR_004577908.1 | other | upstream | 316983 | 7161474 ~ 7204151 (-) | False | lef1 |
| XR_004577909.1 | other | upstream | 316983 | 7161474 ~ 7204151 (-) | False | lef1 |
| trnam-cau_1 | other | upstream | 1622493 | 8466984 ~ 8467055 (-) | True | trnam-cau_1 |
| trnam-cau_2 | other | upstream | 1623545 | 8468036 ~ 8468107 (-) | True | trnam-cau_2 |
| trnam-cau_3 | other | upstream | 1624580 | 8469071 ~ 8469142 (-) | True | trnam-cau_3 |
