Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026939117.2 |
| length | 806 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 3 |
| gene id | LOC113541930 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 28499606 ~ 28501398 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0052547 | regulation of peptidase activity | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU64108 | lncRNA | downstream | 1718 | 28496771 ~ 28497888 (-) | True | G54327 |
| TU64103 | lncRNA | downstream | 14361 | 28484982 ~ 28485245 (-) | True | G54324 |
| TU64099 | lncRNA | downstream | 28508 | 28470891 ~ 28471098 (-) | True | G54320 |
| TU64051 | lncRNA | downstream | 70266 | 28427453 ~ 28429340 (-) | True | G54273 |
| TU64084 | lncRNA | downstream | 132890 | 28366303 ~ 28366716 (-) | True | G54306 |
| XR_004577853.1 | lncRNA | upstream | 501882 | 29003280 ~ 29008803 (-) | True | LOC117596864 |
| XR_004577809.1 | lncRNA | upstream | 575912 | 29077310 ~ 29081966 (-) | True | LOC117596831 |
| TU64569 | lncRNA | upstream | 632482 | 29133880 ~ 29135669 (-) | True | G54775 |
| TU64653 | lncRNA | upstream | 761362 | 29262760 ~ 29263429 (-) | True | G54855 |
| XR_003404254.2 | lncRNA | upstream | 767698 | 29269096 ~ 29270020 (-) | True | LOC113542069 |
| XM_026939251.2 | mRNA | downstream | 3004 | 28494642 ~ 28496602 (-) | True | LOC113542015 |
| XM_026939250.2 | mRNA | downstream | 13847 | 28468956 ~ 28485759 (-) | True | LOC113542013 |
| XM_034302605.1 | mRNA | downstream | 23363 | 28468956 ~ 28476243 (-) | False | LOC113542013 |
| XM_026939481.2 | mRNA | downstream | 53266 | 28437005 ~ 28446340 (-) | True | nolc1 |
| XM_026939354.2 | mRNA | downstream | 110915 | 28333625 ~ 28388691 (-) | True | mcu |
| XM_026939483.2 | mRNA | upstream | 2702 | 28504100 ~ 28505277 (-) | True | LOC113542138 |
| XM_026939312.2 | mRNA | upstream | 14380 | 28515778 ~ 28520829 (-) | True | ephx5 |
| XM_026939311.2 | mRNA | upstream | 109225 | 28610623 ~ 28620025 (-) | True | flrt3 |
| XM_034301980.1 | mRNA | upstream | 1181147 | 29682545 ~ 29684864 (-) | True | LOC113541985 |
| XM_026939190.2 | mRNA | upstream | 1185332 | 29686730 ~ 29695063 (-) | True | zfyve21 |
| TU64047 | other | downstream | 64195 | 28433220 ~ 28435411 (-) | True | G54269 |
| TU63465 | other | downstream | 958307 | 27537776 ~ 27541299 (-) | False | zgc:163080 |
| XR_003404274.1 | other | downstream | 2589487 | 25910018 ~ 25910119 (-) | True | LOC113542183 |
| XR_004577835.1 | other | downstream | 3763719 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_004577838.1 | other | downstream | 3847759 | 24471703 ~ 24651847 (-) | False | lyst |
| trnae-cuc_11 | other | upstream | 700534 | 29201932 ~ 29202003 (-) | True | trnae-cuc_11 |
| LOC113541988 | other | upstream | 1178013 | 29679411 ~ 29681726 (-) | True | LOC113541988 |
| TU65059 | other | upstream | 1610433 | 30111831 ~ 30122655 (-) | True | G55209 |
| TU65057 | other | upstream | 1610636 | 30112034 ~ 30122822 (-) | False | G55209 |
| TU65060 | other | upstream | 1610924 | 30112322 ~ 30122655 (-) | False | G55209 |
