RNA id: XM_026939202.2


Basic Information

Item Value
RNA id XM_026939202.2
length 2982
RNA type mRNA
GC content 0.46
exon number 16
gene id anxa11a
representative True

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 18158463 ~ 18173187 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome
species striped catfish
(Pangasianodon hypophthalmus)

Sequence

ATGTGCGAACACACCTTTACTCCTACCAGAGAATTACTCGGTTTGCTGCAGAATGCAGTGGACATGAACATGAACCTCGAGCAAACGTTTacagaaaatactgtatatgcttgCGTCTGTTCAGCTCAGTTCTACCTCACACTTCACCCTGAGACATTTGTGGATGTGGTGTAATTGCATCTGAACCGCTGCCAGTTATGTAACGCGAATGGGGCAAAAAGCACAGATCAGCGCATATCCCCTTTTCTTTAGAAACCTATTTGAGCAACGGCgcgatttatttttttaaggattaTCTTACAGGCTCTGTAAGTCTAGAAAGCGTAAATTTAGCAGATAAAGAATGTTGATTCTTAAACGCAGTTGGTAAACTCTGCGCAGGATTCCGCAGATCTCCTCTAACCCAAGCGCAGTGTGCGCAGGAGCTGTGCATCTGCGCTGAGTGAACGCACCTATCTGCCGTGTTTCTGTCTACACAGTGACAGGAGGCTTTTGGTTCTCCACCCACTGCTTCTTCCTGATCCACAAACTCCACACAAGTACTGTTTAAAGACTTGCCAGCTCTACTGGCCatAACAGAAGATGAGTTATCCTGGTTATCCTCCTCAGGCCGGTGGTTATCCTCCTCAGGCCGGTGGTTATCCTCCTCAGGCTGGTGGCTACCCTCCACAGGCTGGTGGATATCCTCCCCAGCCAGGAATGTATCCTCCTCAAGCAGGCGGGTATCCTCCTCAAGCAGGCGGGTATCCTCCTCAAGCAGGGATACCCGCCCCAGCCCGGGCTTACCCAGGCCAGCCAGGAGCCTTTCCTCAAATACCTTCAGGTGGATGGGGAACTCCTGGTGCTCCTGGAATGCCTGGATTTAATCCAAGCAACCTGCCTGCAATGGCAAACGAGATCTCTGCTGCCTTGGGAGGATTTAATCCAAATCCATCCATGTTCCCTCAAGTACCTACTGGGGGTCCTGCACCCTACCCTAACCAACAGCCCTTTGGCCTGTCCCCTCAGCCAGGAGGAGCCATGCCTCAGGCACCGGGGATGGGCTATCCAGGAGGGCCAGCTCCGGGCCAGCCCATGCCAGGCTACCCGCAAGCCCCGTCACCTAATCCAACCATGCCAGGCTACCCACAAGCCCCGTCACCTAATCCATCCATGCCAGGTTACCCACAAGCCCCATCAGCCAATCCATCCATGCCTGGCTACCCACAAGGTCCATCACCGACTCCGTCCGTACCTAGCTACCCAAATGTGCCTGCTACCAATCCATCCATGCCCACATATGGAGGAGGAGCTCCCATGGTGCCTGCAATTAATCGTGGATTCAGAGGAACCATCTCAGATTTTCCTGGAGCAGACCCATTAAAAGATGTAGAAGTGCTTAGGAAGGCCATGAAGGGCTTTGGTACTGATGAGCAGGCTATAATTAATCTTCTTGGAAGTCGTTCTAACAGGCAGCGTGTGCCTCTACTGGTTGCATATAAGACTTCCTATGGAAAGGACTTGGTTAAGGATTTGAAGTCTGAGCTTTCTGGGAACTTTGAGAAATTGGTTTTGGCCATGTTGAAGACTCCTGCTCAGTTTGATGCAGCTGAGCTAAAAGAGGCCATCAAGGGAGCAGGGACTGATGAGGCCTGTCTGATCGAGATTCTGTCCTCTCGCACCAATGCAGAGATCAGAGAAATCAATCAAATCTACAAAGCTGaaaacaaGAAATCACTGGAGGATGCGATTAGTGGAGATACATCAGGACACTTTCGCAGGCTGCTCATCTCTCTTGCTCAGGGCAGTcgtgatgagagagagactgtggaTATATCATTAGCCAAACAAGATGCTCAGGCTCTCTATCAGGCTGGGGAAAATAAACTGGGCACTGATGAGTCCAAGTTTAATGCCATCCTGTGTGCTCGAAGCAAACCTCACCTTAGAGCAGtGTTCCAGGAATACCAGCAAATGTGTGGCCGAGACATTCAGAAGAGTATTGAGAGGGAGATGTCTGGAGATCTGGAGAGTGGCATGCTGGCTGTTGTGAAGTGCATTAAGGACACACCAGCCTACTTTGCTGAGAGACTCCACAAAGCCATGAAGGGAATGGGAACCAAAGACCGCACCCTGATCCGCATTATGGTGTCTCGCTCAGAGATGGATATGTTGGACATCCGCCAGGCGTACGTGAGGATGTATGGCAAGTCTCTCTACACGGACATTTCTGGAGACACTTCTGGGGATTACAAGAAATTGCTGTTGAAGCTTTGTGGTGGAAGTGATTAAGAAGATGTAGCTTCTGTCACattaaagaagtaaaaattTGTGCCATACGGTGTTCATacaaaatatattgttataCTCTAAAAATGCTCTTATCTACAATTGCATGTTGTTGCCATAATTATAATTTCACATATGGCATAATGTCGTACAACATTtctgtgctgtatttttatataaatctttattttatagaaagcagcctatatttttttctttacttggGCCATTATGCTGAGTATATTATACAATAAGAAATAGGGGAAATATTATGAATCTcaaaaagtgctgttattgagtctttttggtcttttttcagTAGACTGTTTAAGAAAACATCTGATCTAATCAAATGAGTCAAATCAAGTTGAATCTGATTCAGTATCAGTGTTTCACTCCAAAGCAGCTGTGATACCAACACTCCATATCGGATAGGTGCATCCCTATTAAATGATTTGTAGAGATTTATATATCAGCTAAAtaccaaataatttttttaaattctgttttagTTATATTCAGAAATCAGGAATTGTGGAAACACCAATAATGAGAAAGTGTCAGTAGAAACAGCCTCTGCTGTGGCCTGCTGTTGCACCAATTCCTAGTTGCTTTATGCTATACTCTGGGATCTAAGTGTCACATGTCCATagtaaaatgaatgtaaatgcatgttttatcaTGAATAAAAAAGATGGAATGTGATATACTTCA

Function

GO:

id name namespace
GO:0050819 negative regulation of coagulation biological_process
GO:0005509 calcium ion binding molecular_function
GO:0005544 calcium-dependent phospholipid binding molecular_function

KEGG:

id description
K17095 ANXA7_11; annexin A7/11

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_004577850.1 lncRNA upstream 73664 18081617 ~ 18084799 (+) True LOC113541886
XR_003404227.2 lncRNA upstream 73664 18081617 ~ 18084799 (+) False LOC113541886
TU57164 lncRNA upstream 171892 17986281 ~ 17986571 (+) True G48323
TU57144 lncRNA upstream 217141 17902052 ~ 17941322 (+) True G48305
TU57141 lncRNA upstream 261007 17896322 ~ 17897456 (+) True G48302
TU57367 lncRNA downstream 1113 18174300 ~ 18174499 (+) True G48478
TU57379 lncRNA downstream 48121 18221308 ~ 18221979 (+) False dlg5a
TU57387 lncRNA downstream 48881 18222068 ~ 18222547 (+) True G48494
TU57465 lncRNA downstream 287486 18460673 ~ 18462196 (+) True G48571
TU57373 lncRNA downstream 500124 18673311 ~ 18701906 (+) False G48482
XM_026945478.2 mRNA upstream 8723 18140689 ~ 18149740 (+) False mocos
XM_026945456.2 mRNA upstream 8723 18140690 ~ 18149740 (+) True mocos
XM_026945470.2 mRNA upstream 8723 18140690 ~ 18149740 (+) False mocos
XM_026945464.2 mRNA upstream 8723 18140691 ~ 18149740 (+) False mocos
XM_026934040.2 mRNA upstream 99297 18056126 ~ 18059166 (+) True fignl1
XM_026932946.2 mRNA downstream 3554 18176741 ~ 18222050 (+) True dlg5a
XM_026932954.2 mRNA downstream 3554 18176741 ~ 18222050 (+) False dlg5a
XM_026932962.2 mRNA downstream 3554 18176741 ~ 18222050 (+) False dlg5a
XM_026932970.2 mRNA downstream 3554 18176741 ~ 18222050 (+) False dlg5a
XM_034303143.1 mRNA downstream 54073 18227260 ~ 18372489 (+) True kcnma1a
TU55884 other upstream 1921815 16234535 ~ 16236648 (+) False lrrc18a
XR_003404341.2 other upstream 2085396 16070714 ~ 16073067 (+) True cxcl18a.1
TU55689 other upstream 2086543 16070759 ~ 16071920 (+) False cxcl18a.1
TU55629 other upstream 2361259 15793428 ~ 15797204 (+) False eif4ebp2
XR_004577898.1 other upstream 3791017 14361367 ~ 14367446 (+) False cgas
XR_003403773.2 other downstream 1168163 19341350 ~ 19356098 (+) True sfxn5a
XR_004577568.1 other downstream 1168163 19341350 ~ 19356098 (+) False sfxn5a
XR_004577569.1 other downstream 1168163 19341350 ~ 19356098 (+) False sfxn5a
XR_003403774.2 other downstream 1168163 19341350 ~ 19356098 (+) False sfxn5a
XR_003403775.2 other downstream 1168163 19341350 ~ 19356098 (+) False sfxn5a

Expression Profile