Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026939457.2 |
| length | 734 |
| RNA type | mRNA |
| GC content | 0.38 |
| exon number | 4 |
| gene id | LOC113542117 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 27501662 ~ 27504308 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU63617 | lncRNA | downstream | 133602 | 27367361 ~ 27368060 (-) | True | G53862 |
| TU63597 | lncRNA | downstream | 182040 | 27318088 ~ 27319622 (-) | True | G53851 |
| XR_004577875.1 | lncRNA | downstream | 187311 | 27305874 ~ 27314351 (-) | True | LOC117596885 |
| TU63467 | lncRNA | downstream | 247710 | 27226345 ~ 27253952 (-) | True | G53732 |
| XR_004577888.1 | lncRNA | downstream | 299764 | 27197359 ~ 27201898 (-) | True | LOC117596899 |
| TU63459 | lncRNA | upstream | 26268 | 27530576 ~ 27803450 (-) | False | G53729 |
| TU63458 | lncRNA | upstream | 26371 | 27530679 ~ 27532958 (-) | True | G53729 |
| XR_004577818.1 | lncRNA | upstream | 474136 | 27978444 ~ 28028256 (-) | False | LOC113542054 |
| XR_003404251.2 | lncRNA | upstream | 487979 | 27992287 ~ 28028255 (-) | True | LOC113542054 |
| TU63967 | lncRNA | upstream | 596065 | 28100373 ~ 28100589 (-) | True | G54201 |
| XM_026939479.2 | mRNA | downstream | 27941 | 27437145 ~ 27473721 (-) | True | pcsk2 |
| XM_026939502.2 | mRNA | downstream | 80508 | 27412030 ~ 27421154 (-) | True | prokr1b |
| XM_026939134.1 | mRNA | downstream | 116151 | 27382304 ~ 27385511 (-) | True | cnrip1b |
| XM_026939077.2 | mRNA | downstream | 121031 | 27366318 ~ 27380631 (-) | True | ppp3r1a |
| XM_026939075.2 | mRNA | downstream | 140996 | 27355002 ~ 27360666 (-) | True | wdr92 |
| XM_026939512.2 | mRNA | upstream | 14561 | 27518869 ~ 27525942 (-) | True | polh |
| XM_026939227.2 | mRNA | upstream | 33461 | 27537769 ~ 27541331 (-) | True | zgc:163080 |
| XM_026939225.2 | mRNA | upstream | 43957 | 27548265 ~ 27560020 (-) | True | agpat5 |
| XM_034302635.1 | mRNA | upstream | 57949 | 27562257 ~ 27598047 (-) | False | mcph1 |
| XM_026939280.2 | mRNA | upstream | 57949 | 27562257 ~ 27597952 (-) | False | mcph1 |
| XR_003404274.1 | other | downstream | 1591543 | 25910018 ~ 25910119 (-) | True | LOC113542183 |
| XR_004577835.1 | other | downstream | 2765775 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_003404244.2 | other | downstream | 2849815 | 24453119 ~ 24651847 (-) | False | lyst |
| XR_004577838.1 | other | downstream | 2849815 | 24471703 ~ 24651847 (-) | False | lyst |
| XR_004577819.1 | other | downstream | 3461562 | 24017264 ~ 24040100 (-) | False | mlh1 |
| TU63465 | other | upstream | 33468 | 27537776 ~ 27541299 (-) | False | zgc:163080 |
| TU64047 | other | upstream | 928912 | 28433220 ~ 28435411 (-) | True | G54269 |
| trnae-cuc_11 | other | upstream | 1697624 | 29201932 ~ 29202003 (-) | True | trnae-cuc_11 |
| LOC113541988 | other | upstream | 2175103 | 29679411 ~ 29681726 (-) | True | LOC113541988 |
| TU65059 | other | upstream | 2607523 | 30111831 ~ 30122655 (-) | True | G55209 |
