Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026940185.2 |
| length | 1394 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 7 |
| gene id | asrgl1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 14595202 ~ 14611970 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0033345 | asparagine catabolic process via L-aspartate | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0003948 | N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity | molecular_function |
| GO:0008798 | beta-aspartyl-peptidase activity | molecular_function |
| GO:0004067 | asparaginase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU54753 | lncRNA | upstream | 207766 | 14388029 ~ 14388311 (+) | True | G46337 |
| TU54602 | lncRNA | upstream | 307790 | 14286650 ~ 14288287 (+) | True | G46217 |
| TU54606 | lncRNA | upstream | 307859 | 14286650 ~ 14288218 (+) | False | G46217 |
| TU54604 | lncRNA | upstream | 307859 | 14287418 ~ 14288218 (+) | False | G46217 |
| TU54553 | lncRNA | upstream | 412431 | 14183437 ~ 14183646 (+) | True | G46176 |
| XR_004577856.1 | lncRNA | downstream | 5638 | 14617608 ~ 14626226 (+) | False | LOC113541837 |
| XR_003404224.2 | lncRNA | downstream | 5646 | 14617616 ~ 14626490 (+) | True | LOC113541837 |
| TU54851 | lncRNA | downstream | 5684 | 14617654 ~ 14626372 (+) | False | LOC113541837 |
| TU54849 | lncRNA | downstream | 12503 | 14624473 ~ 14626473 (+) | False | LOC113541837 |
| TU54850 | lncRNA | downstream | 12503 | 14624473 ~ 14626372 (+) | False | LOC113541837 |
| XM_026945100.2 | mRNA | upstream | 227977 | 14361367 ~ 14368100 (+) | True | cgas |
| XM_026941730.2 | mRNA | upstream | 244842 | 14346597 ~ 14351235 (+) | True | eef1a1a |
| XM_034303103.1 | mRNA | upstream | 244842 | 14346677 ~ 14351235 (+) | False | eef1a1a |
| XM_026944267.2 | mRNA | upstream | 254789 | 14331492 ~ 14341288 (+) | True | slc17a5 |
| XM_026937917.2 | mRNA | upstream | 267778 | 14296334 ~ 14328299 (+) | True | rin2 |
| XM_034302783.1 | mRNA | downstream | 46786 | 14658756 ~ 14672999 (+) | True | b3gat2 |
| XM_026936868.2 | mRNA | downstream | 46786 | 14658756 ~ 14672999 (+) | False | b3gat2 |
| XM_026943359.2 | mRNA | downstream | 245959 | 14857929 ~ 14871099 (+) | True | slc2a15a |
| XM_034301900.1 | mRNA | downstream | 286852 | 14898822 ~ 14904713 (+) | False | fgf8a |
| XM_034301895.1 | mRNA | downstream | 286855 | 14898825 ~ 14904713 (+) | True | fgf8a |
| XR_004577898.1 | other | upstream | 228631 | 14361367 ~ 14367446 (+) | False | cgas |
| XR_003404567.2 | other | upstream | 312909 | 14213402 ~ 14283168 (+) | False | slc24a3 |
| TU54033 | other | upstream | 1095031 | 13498092 ~ 13501046 (+) | False | pcbd1 |
| TU53738 | other | upstream | 1562829 | 13032279 ~ 13033248 (+) | False | si:ch211-223p8.8 |
| XR_003404144.2 | other | upstream | 1596115 | 12982406 ~ 12999962 (+) | False | col17a1b |
| TU55629 | other | downstream | 1181458 | 15793428 ~ 15797204 (+) | False | eif4ebp2 |
| XR_003404341.2 | other | downstream | 1458744 | 16070714 ~ 16073067 (+) | True | cxcl18a.1 |
| TU55689 | other | downstream | 1458789 | 16070759 ~ 16071920 (+) | False | cxcl18a.1 |
| TU55884 | other | downstream | 1622565 | 16234535 ~ 16236648 (+) | False | lrrc18a |
| XR_003403773.2 | other | downstream | 4729380 | 19341350 ~ 19356098 (+) | True | sfxn5a |
