Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026942722.2 |
| length | 942 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 4 |
| gene id | mrps26 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 19252850 ~ 19254354 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0005763 | mitochondrial small ribosomal subunit | cellular_component |
| id | description |
|---|---|
| K17405 | MRPS26; small subunit ribosomal protein S26 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU58081 | lncRNA | upstream | 35970 | 19214792 ~ 19216880 (+) | False | grxcr1b |
| TU58057 | lncRNA | upstream | 49163 | 19202230 ~ 19203687 (+) | True | G49104 |
| TU57789 | lncRNA | upstream | 216214 | 19027007 ~ 19036636 (+) | False | selenou1a |
| TU57791 | lncRNA | upstream | 216214 | 19027007 ~ 19036636 (+) | False | selenou1a |
| XR_004577820.1 | lncRNA | upstream | 237276 | 19014191 ~ 19015574 (+) | True | LOC117596836 |
| TU58106 | lncRNA | downstream | 1742 | 19256096 ~ 19257160 (+) | False | LOC113539574 |
| TU58109 | lncRNA | downstream | 12191 | 19266545 ~ 19267589 (+) | True | G49146 |
| TU58126 | lncRNA | downstream | 40728 | 19295082 ~ 19295293 (+) | True | G49157 |
| TU58135 | lncRNA | downstream | 87001 | 19341355 ~ 19345343 (+) | False | sfxn5a |
| TU58192 | lncRNA | downstream | 146297 | 19400651 ~ 19400883 (+) | True | G49214 |
| XM_026934003.2 | mRNA | upstream | 2428 | 19247018 ~ 19250422 (+) | True | si:dkey-33c12.3 |
| XM_034303175.1 | mRNA | upstream | 8977 | 19237356 ~ 19243873 (+) | False | si:dkey-33c12.4 |
| XM_034303176.1 | mRNA | upstream | 8977 | 19237568 ~ 19243873 (+) | True | si:dkey-33c12.4 |
| XM_026943959.2 | mRNA | upstream | 35574 | 19214207 ~ 19217276 (+) | True | grxcr1b |
| XM_026944204.2 | mRNA | upstream | 51717 | 19190273 ~ 19201133 (+) | True | cpxm1a |
| XM_034301756.1 | mRNA | downstream | 1710 | 19256064 ~ 19262088 (+) | True | LOC113539574 |
| XM_034302903.1 | mRNA | downstream | 64471 | 19318825 ~ 19339637 (+) | False | rab11fip5a |
| XM_026939917.2 | mRNA | downstream | 64633 | 19318987 ~ 19339637 (+) | True | rab11fip5a |
| XM_026939926.2 | mRNA | downstream | 64633 | 19318987 ~ 19339637 (+) | False | rab11fip5a |
| XM_026939935.2 | mRNA | downstream | 64634 | 19318988 ~ 19339637 (+) | False | rab11fip5a |
| TU55884 | other | upstream | 3016202 | 16234535 ~ 16236648 (+) | False | lrrc18a |
| XR_003404341.2 | other | upstream | 3179783 | 16070714 ~ 16073067 (+) | True | cxcl18a.1 |
| TU55689 | other | upstream | 3180930 | 16070759 ~ 16071920 (+) | False | cxcl18a.1 |
| TU55629 | other | upstream | 3455646 | 15793428 ~ 15797204 (+) | False | eif4ebp2 |
| XR_004577898.1 | other | upstream | 4885404 | 14361367 ~ 14367446 (+) | False | cgas |
| XR_003403773.2 | other | downstream | 86996 | 19341350 ~ 19356098 (+) | True | sfxn5a |
| XR_004577568.1 | other | downstream | 86996 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| XR_004577569.1 | other | downstream | 86996 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| XR_003403774.2 | other | downstream | 86996 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| XR_003403775.2 | other | downstream | 86996 | 19341350 ~ 19356098 (+) | False | sfxn5a |
