Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026944537.2 |
| length | 698 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 9 |
| gene id | LOC113545271 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 12601078 ~ 12603749 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003404309.2 | lncRNA | upstream | 102059 | 12489514 ~ 12499019 (+) | True | LOC113542444 |
| TU53152 | lncRNA | upstream | 285208 | 12315533 ~ 12315870 (+) | True | G45040 |
| TU53074 | lncRNA | upstream | 442850 | 12156248 ~ 12158228 (+) | True | G44972 |
| TU53076 | lncRNA | upstream | 444956 | 12154384 ~ 12156122 (+) | True | G44974 |
| TU53072 | lncRNA | upstream | 456676 | 12144117 ~ 12144402 (+) | True | G44970 |
| XR_004577794.1 | lncRNA | downstream | 35568 | 12639317 ~ 12643304 (+) | True | LOC117596823 |
| TU53285 | lncRNA | downstream | 44146 | 12647895 ~ 12648406 (+) | True | G45153 |
| TU53325 | lncRNA | downstream | 70659 | 12674408 ~ 12674623 (+) | True | G45170 |
| XR_004577841.1 | lncRNA | downstream | 129683 | 12733432 ~ 12739226 (+) | True | LOC117596851 |
| TU53595 | lncRNA | downstream | 207170 | 12810919 ~ 12811250 (+) | True | G45351 |
| XM_026943052.2 | mRNA | upstream | 6934 | 12573987 ~ 12594144 (+) | True | frmd6 |
| XM_026932148.2 | mRNA | upstream | 78332 | 12517553 ~ 12522746 (+) | True | tmx1 |
| XM_026944217.2 | mRNA | upstream | 182130 | 12403949 ~ 12418948 (+) | True | atl1 |
| XM_026937000.2 | mRNA | upstream | 260086 | 12333000 ~ 12340992 (+) | False | dmac2l |
| XM_026944249.2 | mRNA | downstream | 3780 | 12607529 ~ 12609839 (+) | True | LOC113545096 |
| XM_034303040.1 | mRNA | downstream | 9293 | 12613042 ~ 12615207 (+) | True | LOC117596891 |
| XM_026938485.2 | mRNA | downstream | 98701 | 12702450 ~ 12712789 (+) | True | abcb10 |
| XM_026938498.2 | mRNA | downstream | 110882 | 12714631 ~ 12717322 (+) | True | acta1b |
| XM_026945265.2 | mRNA | downstream | 115156 | 12718905 ~ 12723241 (+) | False | ccsapb |
| XR_004577785.1 | other | upstream | 834664 | 11745749 ~ 11766414 (+) | False | LOC113544122 |
| XR_003404598.2 | other | upstream | 874306 | 11682864 ~ 11726772 (+) | False | LOC113545306 |
| trnag-gcc | other | upstream | 894073 | 11706935 ~ 11707005 (+) | True | trnag-gcc |
| trnag-ccc | other | upstream | 1009673 | 11591335 ~ 11591405 (+) | True | trnag-ccc |
| XR_004577793.1 | other | upstream | 1429964 | 11099593 ~ 11171114 (+) | False | dntt |
| trnay-gua | other | downstream | 32571 | 12636320 ~ 12636406 (+) | True | trnay-gua |
| TU53286 | other | downstream | 36087 | 12639836 ~ 12643195 (+) | False | LOC117596823 |
| trnat-ugu | other | downstream | 64065 | 12667814 ~ 12667886 (+) | True | trnat-ugu |
| XR_004577802.1 | other | downstream | 325810 | 12929559 ~ 12936802 (+) | False | spef1 |
| XR_004577803.1 | other | downstream | 325810 | 12929559 ~ 12936802 (+) | False | spef1 |
