Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026944643.2 |
| length | 1063 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 3 |
| gene id | noto |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 19374309 ~ 19375581 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0032835 | glomerulus development | biological_process |
| GO:0003140 | determination of left/right asymmetry in lateral mesoderm | biological_process |
| GO:2000223 | regulation of BMP signaling pathway involved in heart jogging | biological_process |
| GO:0003160 | endocardium morphogenesis | biological_process |
| GO:0048319 | axial mesoderm morphogenesis | biological_process |
| GO:0014028 | notochord formation | biological_process |
| GO:0021982 | pineal gland development | biological_process |
| GO:0030325 | adrenal gland development | biological_process |
| GO:0001947 | heart looping | biological_process |
| GO:0003677 | DNA binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU58155 | lncRNA | downstream | 122446 | 19251593 ~ 19251863 (-) | True | G49184 |
| TU58066 | lncRNA | downstream | 183694 | 19190327 ~ 19190615 (-) | True | G49108 |
| TU58001 | lncRNA | downstream | 321558 | 19052527 ~ 19052751 (-) | True | G49053 |
| TU57913 | lncRNA | downstream | 404513 | 18969591 ~ 18969796 (-) | True | G48975 |
| TU57908 | lncRNA | downstream | 416850 | 18957157 ~ 18957459 (-) | True | G48970 |
| TU58193 | lncRNA | upstream | 25083 | 19400664 ~ 19400863 (-) | True | G49215 |
| TU58214 | lncRNA | upstream | 52165 | 19427746 ~ 19428725 (-) | True | G49232 |
| TU58488 | lncRNA | upstream | 313011 | 19688592 ~ 19688877 (-) | True | G49481 |
| TU58495 | lncRNA | upstream | 338584 | 19714165 ~ 19715420 (-) | True | G49484 |
| TU58497 | lncRNA | upstream | 338837 | 19714418 ~ 19715420 (-) | False | G49484 |
| XM_026942251.2 | mRNA | downstream | 11329 | 19357615 ~ 19362980 (-) | True | emx1 |
| XM_026937744.1 | mRNA | downstream | 71767 | 19301205 ~ 19302542 (-) | True | LOC113540998 |
| XM_026943469.2 | mRNA | downstream | 79608 | 19287108 ~ 19294701 (-) | True | mavs |
| XM_026945113.2 | mRNA | downstream | 88268 | 19283096 ~ 19286041 (-) | True | pank2 |
| XM_026935376.2 | mRNA | downstream | 92484 | 19261810 ~ 19281825 (-) | True | loxl3b |
| XM_034302619.1 | mRNA | upstream | 239136 | 19614717 ~ 19667659 (-) | True | atrn |
| XM_034302620.1 | mRNA | upstream | 239136 | 19614717 ~ 19667658 (-) | False | atrn |
| XM_034302993.1 | mRNA | upstream | 293824 | 19669405 ~ 19700122 (-) | False | eif2ak3 |
| XM_034302992.1 | mRNA | upstream | 293824 | 19669405 ~ 19700122 (-) | True | eif2ak3 |
| XM_026941796.2 | mRNA | upstream | 325498 | 19701079 ~ 19713506 (-) | True | rpia |
| TU58169 | other | downstream | 54576 | 19316487 ~ 19319733 (-) | True | G49195 |
| TU57664 | other | downstream | 760908 | 18330368 ~ 18613401 (-) | True | lrmda |
| TU56951 | other | downstream | 1712925 | 17657581 ~ 17661384 (-) | False | col13a1 |
| XR_004577786.1 | other | downstream | 1799887 | 17562332 ~ 17574422 (-) | False | LOC113538666 |
| XR_004577815.1 | other | upstream | 260257 | 19635838 ~ 19667661 (-) | False | atrn |
| TU58944 | other | upstream | 982353 | 20357934 ~ 20369097 (-) | False | gng2 |
| TU58943 | other | upstream | 982407 | 20357988 ~ 20369097 (-) | False | gng2 |
| TU58946 | other | upstream | 982407 | 20357988 ~ 20369429 (-) | False | gng2 |
| TU59887 | other | upstream | 2236193 | 21611774 ~ 21614267 (-) | False | plekhh2 |
