Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034302830.1 |
| length | 675 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 6 |
| gene id | rps24 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 15821093 ~ 15827467 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU55615 | lncRNA | upstream | 105569 | 15711137 ~ 15715524 (+) | True | G47043 |
| TU55393 | lncRNA | upstream | 347223 | 15473201 ~ 15473870 (+) | True | G46849 |
| TU55373 | lncRNA | upstream | 401451 | 15419029 ~ 15419642 (+) | True | G46833 |
| TU55286 | lncRNA | upstream | 736783 | 15079813 ~ 15084310 (+) | True | G46765 |
| TU55651 | lncRNA | downstream | 66114 | 15893581 ~ 15896079 (+) | True | G47071 |
| TU55664 | lncRNA | downstream | 205837 | 16033304 ~ 16035339 (+) | True | G47084 |
| TU55821 | lncRNA | downstream | 276369 | 16103836 ~ 16104050 (+) | True | G47224 |
| TU55827 | lncRNA | downstream | 297199 | 16124666 ~ 16134002 (+) | True | cxcl12a |
| TU55863 | lncRNA | downstream | 365228 | 16192695 ~ 16203524 (+) | True | G47265 |
| XM_026943066.2 | mRNA | upstream | 8321 | 15800603 ~ 15812772 (+) | True | pald1b |
| XM_026943092.2 | mRNA | upstream | 8613 | 15799228 ~ 15812480 (+) | False | pald1b |
| XM_026943082.2 | mRNA | upstream | 8613 | 15799229 ~ 15812480 (+) | False | pald1b |
| XM_026943075.2 | mRNA | upstream | 8613 | 15800602 ~ 15812480 (+) | False | pald1b |
| XM_026940901.2 | mRNA | upstream | 23902 | 15793406 ~ 15797191 (+) | True | eif4ebp2 |
| XM_026935835.2 | mRNA | downstream | 45850 | 15873317 ~ 15986353 (+) | False | zmiz1a |
| XM_026935804.2 | mRNA | downstream | 45851 | 15873318 ~ 15986353 (+) | True | zmiz1a |
| XM_026935819.2 | mRNA | downstream | 45851 | 15873318 ~ 15986353 (+) | False | zmiz1a |
| XM_026935812.2 | mRNA | downstream | 45851 | 15873318 ~ 15986353 (+) | False | zmiz1a |
| XM_026935827.2 | mRNA | downstream | 45851 | 15873318 ~ 15986353 (+) | False | zmiz1a |
| TU55629 | other | upstream | 23889 | 15793428 ~ 15797204 (+) | False | eif4ebp2 |
| XR_004577898.1 | other | upstream | 1453647 | 14361367 ~ 14367446 (+) | False | cgas |
| XR_003404567.2 | other | upstream | 1537925 | 14213402 ~ 14283168 (+) | False | slc24a3 |
| TU54033 | other | upstream | 2320047 | 13498092 ~ 13501046 (+) | False | pcbd1 |
| TU53738 | other | upstream | 2787845 | 13032279 ~ 13033248 (+) | False | si:ch211-223p8.8 |
| XR_003404341.2 | other | downstream | 243247 | 16070714 ~ 16073067 (+) | True | cxcl18a.1 |
| TU55689 | other | downstream | 243292 | 16070759 ~ 16071920 (+) | False | cxcl18a.1 |
| TU55884 | other | downstream | 407068 | 16234535 ~ 16236648 (+) | False | lrrc18a |
| XR_003403773.2 | other | downstream | 3513883 | 19341350 ~ 19356098 (+) | True | sfxn5a |
| XR_004577568.1 | other | downstream | 3513883 | 19341350 ~ 19356098 (+) | False | sfxn5a |
