Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026945610.2 |
| length | 1131 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 10 |
| gene id | haao |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 21899556 ~ 21905109 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0009435 | NAD biosynthetic process | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0000334 | 3-hydroxyanthranilate 3,4-dioxygenase activity | molecular_function |
| GO:0005506 | iron ion binding | molecular_function |
| id | description |
|---|---|
| K00452 | HAAO; 3-hydroxyanthranilate 3,4-dioxygenase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU60026 | lncRNA | upstream | 24541 | 21874813 ~ 21875015 (+) | True | G50783 |
| TU60015 | lncRNA | upstream | 30528 | 21868824 ~ 21869028 (+) | True | G50772 |
| TU59732 | lncRNA | upstream | 325503 | 21567415 ~ 21574053 (+) | True | G50516 |
| XR_004577869.1 | lncRNA | upstream | 373489 | 21525437 ~ 21526067 (+) | True | LOC117596875 |
| TU59746 | lncRNA | upstream | 381801 | 21516282 ~ 21517755 (+) | True | G50528 |
| XR_003404631.2 | lncRNA | downstream | 99609 | 22004718 ~ 22015489 (+) | True | LOC113545609 |
| TU60120 | lncRNA | downstream | 115221 | 22020330 ~ 22023811 (+) | False | wu:fj16a03 |
| TU60131 | lncRNA | downstream | 130373 | 22035482 ~ 22041152 (+) | True | G50880 |
| TU60136 | lncRNA | downstream | 130373 | 22035482 ~ 22041152 (+) | False | G50880 |
| TU60140 | lncRNA | downstream | 130373 | 22035482 ~ 22041152 (+) | False | G50880 |
| XM_026940045.2 | mRNA | upstream | 163023 | 21733757 ~ 21736533 (+) | True | LOC113542474 |
| XM_034302820.1 | mRNA | upstream | 167692 | 21645736 ~ 21731864 (+) | False | thada |
| XM_026933215.2 | mRNA | downstream | 9440 | 21914549 ~ 21917668 (+) | True | hcar1-3 |
| XM_026932766.2 | mRNA | downstream | 49796 | 21954905 ~ 21960399 (+) | True | LOC113537982 |
| XM_026932775.2 | mRNA | downstream | 49796 | 21954905 ~ 21960399 (+) | False | LOC113537982 |
| XM_026932110.2 | mRNA | downstream | 62632 | 21967741 ~ 21970960 (+) | True | LOC113537563 |
| XM_034302562.1 | mRNA | downstream | 115213 | 22020322 ~ 22023560 (+) | False | wu:fj16a03 |
| trnae-cuc_10 | other | upstream | 894037 | 21005450 ~ 21005519 (+) | True | trnae-cuc_10 |
| TU59013 | other | upstream | 1324077 | 20574973 ~ 20575479 (+) | True | G49862 |
| XR_004577569.1 | other | upstream | 2543458 | 19341350 ~ 19356098 (+) | False | sfxn5a |
| TU60121 | other | downstream | 116298 | 22021407 ~ 22023811 (+) | True | wu:fj16a03 |
| TU60615 | other | downstream | 879219 | 22784328 ~ 22786505 (+) | True | G51271 |
| XR_003404579.1 | other | downstream | 1209076 | 23114185 ~ 23115039 (+) | True | LOC113545030 |
| TU60962 | other | downstream | 1549319 | 23454428 ~ 23455549 (+) | True | G51562 |
| TU61166 | other | downstream | 1791923 | 23697032 ~ 23697294 (+) | True | G51749 |
