Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034301424.1 |
| length | 1025 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 8 |
| gene id | si:dkey-9i23.8 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 8618725 ~ 8623407 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU50485 | lncRNA | upstream | 65343 | 8552711 ~ 8553382 (+) | True | G42718 |
| TU50484 | lncRNA | upstream | 66841 | 8551498 ~ 8551884 (+) | True | G42717 |
| TU50449 | lncRNA | upstream | 148844 | 8469629 ~ 8469881 (+) | True | trnak-cuu |
| XR_004577904.1 | lncRNA | upstream | 190084 | 8425810 ~ 8428641 (+) | True | LOC117596914 |
| XR_004577895.1 | lncRNA | upstream | 346820 | 8270410 ~ 8271905 (+) | True | LOC117596904 |
| TU50545 | lncRNA | downstream | 34818 | 8658225 ~ 8659561 (+) | True | G42763 |
| TU50572 | lncRNA | downstream | 141204 | 8764611 ~ 8767603 (+) | True | G42782 |
| TU50573 | lncRNA | downstream | 145917 | 8769324 ~ 8771063 (+) | True | G42783 |
| TU50585 | lncRNA | downstream | 189429 | 8812836 ~ 8870926 (+) | True | G42792 |
| TU50628 | lncRNA | downstream | 330115 | 8953522 ~ 8954026 (+) | True | G42833 |
| XM_026935055.2 | mRNA | upstream | 71987 | 8536839 ~ 8546738 (+) | True | LOC113539337 |
| XM_026935045.2 | mRNA | upstream | 71987 | 8536839 ~ 8546738 (+) | False | LOC113539337 |
| XM_026935228.2 | mRNA | upstream | 84690 | 8530455 ~ 8534035 (+) | True | LOC113539481 |
| XM_026935251.2 | mRNA | upstream | 101495 | 8511977 ~ 8517230 (+) | True | tmem176 |
| XM_026934975.2 | mRNA | upstream | 154286 | 8456731 ~ 8464439 (+) | True | si:ch211-89o9.6 |
| XM_026934966.2 | mRNA | downstream | 3496 | 8626903 ~ 8634451 (+) | True | si:dkey-9i23.6 |
| XM_026935289.2 | mRNA | downstream | 47391 | 8670798 ~ 8673429 (+) | True | pold4 |
| XM_026934770.2 | mRNA | downstream | 52177 | 8675584 ~ 8712889 (+) | True | si:dkey-28b4.8 |
| XM_026934999.2 | mRNA | downstream | 100501 | 8723908 ~ 8739750 (+) | True | slc43a1b |
| XM_026935158.2 | mRNA | downstream | 120421 | 8743828 ~ 8751846 (+) | True | tmx2b |
| trnak-cuu | other | upstream | 149029 | 8469624 ~ 8469696 (+) | False | trnak-cuu |
| TU50445 | other | upstream | 152413 | 8465747 ~ 8466312 (+) | True | G42685 |
| XR_003404394.2 | other | upstream | 952692 | 7649198 ~ 7666033 (+) | False | naa15b |
| TU49753 | other | upstream | 1397702 | 7203950 ~ 7221023 (+) | True | G42075 |
| TU48562 | other | upstream | 3276975 | 5318534 ~ 5341750 (+) | True | G41047 |
| TU52056 | other | downstream | 1928852 | 10552259 ~ 10558295 (+) | True | sprn |
| XR_004577889.1 | other | downstream | 1971167 | 10594574 ~ 10608704 (+) | False | LOC113543929 |
| XR_004577793.1 | other | downstream | 2476186 | 11099593 ~ 11171114 (+) | False | dntt |
| trnag-ccc | other | downstream | 2967928 | 11591335 ~ 11591405 (+) | True | trnag-ccc |
| XR_003404598.2 | other | downstream | 3059457 | 11682864 ~ 11726772 (+) | False | LOC113545306 |
