Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034301541.1 |
| length | 759 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 4 |
| gene id | LOC113541130 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 10567357 ~ 10568828 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU51991 | lncRNA | downstream | 250909 | 10315725 ~ 10316448 (-) | True | G43987 |
| TU51975 | lncRNA | downstream | 262275 | 10291067 ~ 10305082 (-) | True | G43982 |
| TU51974 | lncRNA | downstream | 301769 | 10265356 ~ 10265588 (-) | True | G43981 |
| TU51966 | lncRNA | downstream | 313419 | 10253724 ~ 10253938 (-) | True | G43978 |
| TU51888 | lncRNA | downstream | 324475 | 10241941 ~ 10242882 (-) | True | G43910 |
| TU52133 | lncRNA | upstream | 84886 | 10653714 ~ 10655844 (-) | True | G44103 |
| TU52138 | lncRNA | upstream | 104518 | 10673346 ~ 10723668 (-) | True | G44105 |
| TU52216 | lncRNA | upstream | 247844 | 10816672 ~ 10817292 (-) | True | G44173 |
| TU52312 | lncRNA | upstream | 353481 | 10922309 ~ 10925258 (-) | True | G44262 |
| TU52323 | lncRNA | upstream | 384677 | 10953505 ~ 10956492 (-) | True | G44271 |
| XM_026932621.2 | mRNA | downstream | 4769 | 10557601 ~ 10562588 (-) | True | mtg1 |
| XM_026941836.2 | mRNA | downstream | 50400 | 10513951 ~ 10516957 (-) | False | chchd1 |
| XM_034302507.1 | mRNA | downstream | 50448 | 10513951 ~ 10516909 (-) | True | chchd1 |
| XM_026932576.2 | mRNA | downstream | 55510 | 10492837 ~ 10511847 (-) | True | si:ch211-51a6.2 |
| XM_026936466.2 | mRNA | downstream | 78550 | 10449319 ~ 10488807 (-) | True | zswim8 |
| XM_026936634.2 | mRNA | upstream | 19048 | 10587876 ~ 10593240 (-) | True | pbld |
| XM_026942485.2 | mRNA | upstream | 39031 | 10607859 ~ 10615623 (-) | True | opn3 |
| XM_026943376.2 | mRNA | upstream | 81625 | 10650453 ~ 10659241 (-) | False | cdc42ep3 |
| XM_034303069.1 | mRNA | upstream | 81625 | 10650453 ~ 10659241 (-) | True | cdc42ep3 |
| XM_034301338.1 | mRNA | upstream | 162703 | 10731531 ~ 10735897 (-) | True | LOC113545523 |
| TU51003 | other | downstream | 1338473 | 9224881 ~ 9228884 (-) | True | sf3b5 |
| TU50809 | other | downstream | 1713563 | 8801243 ~ 8853794 (-) | True | G42967 |
| TU50810 | other | downstream | 1713563 | 8849109 ~ 8853794 (-) | False | G42967 |
| XR_003403913.2 | other | downstream | 1783559 | 8755869 ~ 8783798 (-) | False | zdhhc5a |
| trnae-cuc_7 | other | downstream | 2096928 | 8470358 ~ 8470429 (-) | True | trnae-cuc_7 |
| trnag-gcc_1 | other | upstream | 1139786 | 11708614 ~ 11708684 (-) | True | trnag-gcc_1 |
| TU53378 | other | upstream | 1576067 | 12144895 ~ 12152506 (-) | False | tmem254 |
| TU53492 | other | upstream | 1955808 | 12524636 ~ 12534075 (-) | False | LOC113537616 |
| TU53486 | other | upstream | 1962615 | 12531443 ~ 12534075 (-) | False | LOC113537616 |
| TU53537 | other | upstream | 2062985 | 12631813 ~ 12633015 (-) | False | LOC113539135 |
