Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034302931.1 |
| length | 1110 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 9 |
| gene id | zgc:153169 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 12769003 ~ 12774087 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0016787 | hydrolase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577841.1 | lncRNA | upstream | 30391 | 12733432 ~ 12739226 (+) | True | LOC117596851 |
| TU53325 | lncRNA | upstream | 94994 | 12674408 ~ 12674623 (+) | True | G45170 |
| TU53285 | lncRNA | upstream | 121211 | 12647895 ~ 12648406 (+) | True | G45153 |
| XR_004577794.1 | lncRNA | upstream | 126313 | 12639317 ~ 12643304 (+) | True | LOC117596823 |
| XR_003404309.2 | lncRNA | upstream | 270598 | 12489514 ~ 12499019 (+) | True | LOC113542444 |
| TU53595 | lncRNA | downstream | 37709 | 12810919 ~ 12811250 (+) | True | G45351 |
| TU53604 | lncRNA | downstream | 47646 | 12820856 ~ 12821389 (+) | True | G45360 |
| TU53620 | lncRNA | downstream | 96793 | 12870003 ~ 12870223 (+) | True | G45376 |
| TU53723 | lncRNA | downstream | 186880 | 12960090 ~ 13031136 (+) | True | G45453 |
| TU53729 | lncRNA | downstream | 238736 | 13011946 ~ 13017600 (+) | True | G45459 |
| XM_026936770.2 | mRNA | upstream | 6976 | 12759697 ~ 12762641 (+) | True | pdcd2 |
| XM_026945265.2 | mRNA | upstream | 46376 | 12718905 ~ 12723241 (+) | False | ccsapb |
| XM_026937247.2 | mRNA | downstream | 1212 | 12774422 ~ 12782694 (+) | True | rab1ab |
| XM_026945669.2 | mRNA | downstream | 35873 | 12809083 ~ 12844674 (+) | False | sertad2b |
| XM_026945675.2 | mRNA | downstream | 35874 | 12809084 ~ 12844674 (+) | False | sertad2b |
| XM_034302544.1 | mRNA | downstream | 57496 | 12830706 ~ 12844674 (+) | False | sertad2b |
| XM_026945660.2 | mRNA | downstream | 57496 | 12830706 ~ 12844674 (+) | False | sertad2b |
| trnat-ugu | other | upstream | 101731 | 12667814 ~ 12667886 (+) | True | trnat-ugu |
| TU53286 | other | upstream | 126422 | 12639836 ~ 12643195 (+) | False | LOC117596823 |
| trnay-gua | other | upstream | 133211 | 12636320 ~ 12636406 (+) | True | trnay-gua |
| XR_004577785.1 | other | upstream | 1003203 | 11745749 ~ 11766414 (+) | False | LOC113544122 |
| trnag-gcc | other | upstream | 1062612 | 11706935 ~ 11707005 (+) | True | trnag-gcc |
| XR_004577802.1 | other | downstream | 156349 | 12929559 ~ 12936802 (+) | False | spef1 |
| XR_004577803.1 | other | downstream | 156349 | 12929559 ~ 12936802 (+) | False | spef1 |
| XR_003404144.2 | other | downstream | 209196 | 12982406 ~ 12999962 (+) | False | col17a1b |
| TU53738 | other | downstream | 259069 | 13032279 ~ 13033248 (+) | False | si:ch211-223p8.8 |
| TU54033 | other | downstream | 724882 | 13498092 ~ 13501046 (+) | False | pcbd1 |
