Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034303028.1 |
| length | 1076 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 7 |
| gene id | LOC113543512 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 13314595 ~ 13317625 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0004364 | glutathione transferase activity | molecular_function |
| id | description |
|---|---|
| K00799 | GST, gst; glutathione S-transferase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU53890 | lncRNA | upstream | 1374 | 13312994 ~ 13313221 (+) | True | G45594 |
| TU53888 | lncRNA | upstream | 2515 | 13311677 ~ 13312080 (+) | True | G45592 |
| TU53786 | lncRNA | upstream | 218714 | 13095671 ~ 13095881 (+) | True | G45508 |
| TU53744 | lncRNA | upstream | 262066 | 13052240 ~ 13052529 (+) | True | G45473 |
| TU53723 | lncRNA | upstream | 283459 | 12960090 ~ 13031136 (+) | True | G45453 |
| TU53962 | lncRNA | downstream | 58174 | 13375799 ~ 13375999 (+) | True | G45640 |
| TU54050 | lncRNA | downstream | 204214 | 13521839 ~ 13599015 (+) | True | G45712 |
| TU54051 | lncRNA | downstream | 205281 | 13522906 ~ 13594825 (+) | True | G45713 |
| XR_003404657.2 | lncRNA | downstream | 326495 | 13644120 ~ 13645338 (+) | True | LOC113545747 |
| XR_004577873.1 | lncRNA | downstream | 571654 | 13889279 ~ 13889849 (+) | True | LOC117596881 |
| XM_034302959.1 | mRNA | upstream | 4326 | 13295232 ~ 13310269 (+) | False | chuk |
| XM_034302960.1 | mRNA | upstream | 4326 | 13295814 ~ 13310269 (+) | False | chuk |
| XM_026940628.2 | mRNA | upstream | 4326 | 13295902 ~ 13310269 (+) | True | chuk |
| XM_026940636.2 | mRNA | upstream | 4326 | 13295902 ~ 13310269 (+) | False | chuk |
| XM_026944816.2 | mRNA | upstream | 77616 | 13229662 ~ 13236979 (+) | True | ap3m1 |
| XM_026944444.2 | mRNA | downstream | 8268 | 13325893 ~ 13329493 (+) | True | calhm3 |
| XM_034301642.1 | mRNA | downstream | 12289 | 13329914 ~ 13333161 (+) | True | calhm1 |
| XM_026942239.2 | mRNA | downstream | 15716 | 13333341 ~ 13338334 (+) | True | LOC113543782 |
| XM_034302547.1 | mRNA | downstream | 15716 | 13333341 ~ 13338334 (+) | False | LOC113543782 |
| XM_026932830.2 | mRNA | downstream | 21633 | 13339258 ~ 13346106 (+) | False | si:dkey-51a16.9 |
| TU53738 | other | upstream | 281347 | 13032279 ~ 13033248 (+) | False | si:ch211-223p8.8 |
| XR_003404144.2 | other | upstream | 314633 | 12982406 ~ 12999962 (+) | False | col17a1b |
| XR_004577802.1 | other | upstream | 377793 | 12929559 ~ 12936802 (+) | False | spef1 |
| XR_004577803.1 | other | upstream | 377793 | 12929559 ~ 12936802 (+) | False | spef1 |
| trnat-ugu | other | upstream | 646709 | 12667814 ~ 12667886 (+) | True | trnat-ugu |
| TU54033 | other | downstream | 180467 | 13498092 ~ 13501046 (+) | False | pcbd1 |
| XR_003404567.2 | other | downstream | 895777 | 14213402 ~ 14283168 (+) | False | slc24a3 |
| XR_004577898.1 | other | downstream | 1043742 | 14361367 ~ 14367446 (+) | False | cgas |
| TU55629 | other | downstream | 2475803 | 15793428 ~ 15797204 (+) | False | eif4ebp2 |
| XR_003404341.2 | other | downstream | 2753089 | 16070714 ~ 16073067 (+) | True | cxcl18a.1 |
