Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003404245.1 |
| length | 264 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 3 |
| gene id | LOC113542010 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 26505767 ~ 26506244 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU62725 | lncRNA | downstream | 140409 | 26365138 ~ 26365358 (-) | True | G53065 |
| TU62711 | lncRNA | downstream | 149971 | 26286924 ~ 26355796 (-) | True | G53051 |
| TU62704 | lncRNA | downstream | 216834 | 26253345 ~ 26288933 (-) | True | G53046 |
| TU62707 | lncRNA | downstream | 219487 | 26250355 ~ 26286280 (-) | True | G53047 |
| TU62841 | lncRNA | upstream | 21025 | 26527269 ~ 26528340 (-) | True | G53175 |
| TU62844 | lncRNA | upstream | 28563 | 26534807 ~ 26535023 (-) | True | G53178 |
| TU62845 | lncRNA | upstream | 28839 | 26535083 ~ 26535294 (-) | True | G53179 |
| TU62847 | lncRNA | upstream | 33285 | 26539529 ~ 26539796 (-) | True | G53181 |
| TU62848 | lncRNA | upstream | 36720 | 26542964 ~ 26543222 (-) | True | G53182 |
| XM_026939275.2 | mRNA | downstream | 38386 | 26366178 ~ 26467381 (-) | True | wdr11 |
| XM_034302699.1 | mRNA | downstream | 154616 | 26350129 ~ 26351151 (-) | True | LOC117596837 |
| XM_034302953.1 | mRNA | downstream | 395358 | 26076592 ~ 26110409 (-) | True | tmem63ba |
| XM_026939067.2 | mRNA | downstream | 432013 | 26066974 ~ 26073754 (-) | True | LOC113541884 |
| XM_034301629.1 | mRNA | downstream | 433778 | 26066974 ~ 26071989 (-) | False | LOC113541884 |
| XM_026939066.2 | mRNA | upstream | 22762 | 26529006 ~ 26620986 (-) | True | plpp4 |
| XM_026939462.1 | mRNA | upstream | 123006 | 26629250 ~ 26629878 (-) | True | lhb |
| XM_026939344.2 | mRNA | upstream | 133305 | 26639549 ~ 26667669 (-) | True | arfgef3 |
| XM_026939345.2 | mRNA | upstream | 134684 | 26640928 ~ 26668018 (-) | False | arfgef3 |
| XM_026939221.2 | mRNA | upstream | 180881 | 26687125 ~ 26706755 (-) | True | elovl5 |
| XR_003404274.1 | other | downstream | 595648 | 25910018 ~ 25910119 (-) | True | LOC113542183 |
| XR_004577835.1 | other | downstream | 1769880 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_003404244.2 | other | downstream | 1853920 | 24453119 ~ 24651847 (-) | False | lyst |
| XR_004577838.1 | other | downstream | 1853920 | 24471703 ~ 24651847 (-) | False | lyst |
| XR_004577819.1 | other | downstream | 2465667 | 24017264 ~ 24040100 (-) | False | mlh1 |
| TU63465 | other | upstream | 1031532 | 27537776 ~ 27541299 (-) | False | zgc:163080 |
| TU64047 | other | upstream | 1926976 | 28433220 ~ 28435411 (-) | True | G54269 |
| trnae-cuc_11 | other | upstream | 2695688 | 29201932 ~ 29202003 (-) | True | trnae-cuc_11 |
| LOC113541988 | other | upstream | 3173167 | 29679411 ~ 29681726 (-) | True | LOC113541988 |
| TU65059 | other | upstream | 3605587 | 30111831 ~ 30122655 (-) | True | G55209 |
