Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003404272.2 |
| length | 326 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 3 |
| gene id | LOC113542178 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 27055764 ~ 27056998 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU63006 | lncRNA | upstream | 18956 | 27033849 ~ 27036808 (+) | True | G53316 |
| TU63053 | lncRNA | upstream | 36918 | 27017961 ~ 27018846 (+) | True | G53363 |
| TU62953 | lncRNA | upstream | 121499 | 26933938 ~ 26934265 (+) | True | G53280 |
| TU62838 | lncRNA | upstream | 256246 | 26798698 ~ 26799518 (+) | True | G53172 |
| TU62752 | lncRNA | upstream | 502612 | 26552936 ~ 26553152 (+) | True | G53092 |
| XR_004577887.1 | lncRNA | downstream | 1880 | 27058878 ~ 27068180 (+) | True | LOC117596898 |
| TU63002 | lncRNA | downstream | 54546 | 27111544 ~ 27121939 (+) | True | G53312 |
| TU63030 | lncRNA | downstream | 185957 | 27242955 ~ 27244158 (+) | True | G53340 |
| XR_004577892.1 | lncRNA | downstream | 204133 | 27261131 ~ 27273177 (+) | True | LOC117596902 |
| TU63096 | lncRNA | downstream | 280049 | 27337047 ~ 27341096 (+) | True | G53402 |
| XM_026939387.2 | mRNA | upstream | 122014 | 26925234 ~ 26933750 (+) | True | gfral |
| XM_026939484.2 | mRNA | upstream | 132513 | 26905497 ~ 26923251 (+) | True | hcrtr2 |
| XM_026939529.2 | mRNA | upstream | 168685 | 26873228 ~ 26887079 (+) | True | fam83b |
| XM_026939159.2 | mRNA | upstream | 190627 | 26830224 ~ 26865137 (+) | True | mlip |
| XM_034303102.1 | mRNA | downstream | 140911 | 27197909 ~ 27207245 (+) | False | znf451 |
| XM_026939377.2 | mRNA | downstream | 140911 | 27197909 ~ 27207245 (+) | False | znf451 |
| XM_026939378.2 | mRNA | downstream | 140911 | 27197909 ~ 27206370 (+) | False | znf451 |
| XM_026939381.2 | mRNA | downstream | 150330 | 27207328 ~ 27213122 (+) | True | bag2 |
| XM_026939201.2 | mRNA | downstream | 187953 | 27244951 ~ 27257879 (+) | True | si:ch73-52p7.1 |
| TU63018 | other | upstream | 63053 | 26985978 ~ 26992711 (+) | True | G53328 |
| TU61306 | other | upstream | 2997877 | 24055241 ~ 24057887 (+) | True | LOC113540163 |
| TU61214 | other | upstream | 3250269 | 23793680 ~ 23805495 (+) | False | slc29a3 |
| TU61166 | other | upstream | 3358470 | 23697032 ~ 23697294 (+) | True | G51749 |
| TU60962 | other | upstream | 3600215 | 23454428 ~ 23455549 (+) | True | G51562 |
| XR_003404257.2 | other | downstream | 140911 | 27197909 ~ 27207245 (+) | False | znf451 |
| XR_004577886.1 | other | downstream | 140911 | 27197909 ~ 27206395 (+) | False | znf451 |
| XR_003404258.2 | other | downstream | 140911 | 27197909 ~ 27206370 (+) | True | znf451 |
| TU63410 | other | downstream | 1390379 | 28447377 ~ 28448311 (+) | True | G53692 |
| trnav-cac | other | downstream | 2048446 | 29105444 ~ 29105516 (+) | True | trnav-cac |
