Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003404274.1 |
| length | 102 |
| RNA type | ncRNA |
| GC content | 0.43 |
| exon number | 1 |
| gene id | LOC113542183 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 25910018 ~ 25910119 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU62388 | lncRNA | downstream | 43931 | 25865886 ~ 25866087 (-) | True | G52771 |
| TU62373 | lncRNA | downstream | 63126 | 25843285 ~ 25846892 (-) | True | G52759 |
| TU62375 | lncRNA | downstream | 63905 | 25843012 ~ 25846113 (-) | False | G52759 |
| TU62330 | lncRNA | downstream | 171082 | 25736578 ~ 25738936 (-) | True | G52716 |
| TU62328 | lncRNA | downstream | 179148 | 25730445 ~ 25730870 (-) | True | G52714 |
| TU62409 | lncRNA | upstream | 5343 | 25915462 ~ 25916951 (-) | True | G52792 |
| TU62635 | lncRNA | upstream | 206769 | 26116888 ~ 26117206 (-) | True | G52981 |
| TU62707 | lncRNA | upstream | 340236 | 26250355 ~ 26286280 (-) | True | G53047 |
| TU62704 | lncRNA | upstream | 343226 | 26253345 ~ 26288933 (-) | True | G53046 |
| TU62709 | lncRNA | upstream | 348311 | 26258430 ~ 26262823 (-) | True | G53049 |
| XM_026939300.2 | mRNA | downstream | 118618 | 25772887 ~ 25791400 (-) | True | lhcgr |
| XM_034302898.1 | mRNA | downstream | 139972 | 25750053 ~ 25770046 (-) | True | mertka |
| XM_034302899.1 | mRNA | downstream | 139974 | 25750053 ~ 25770044 (-) | False | mertka |
| XM_026939162.2 | mRNA | downstream | 212167 | 25685684 ~ 25697851 (-) | True | LOC113541965 |
| XM_026939496.2 | mRNA | downstream | 405262 | 25494676 ~ 25504756 (-) | True | msh6 |
| XM_034302838.1 | mRNA | upstream | 12911 | 25923030 ~ 25966974 (-) | False | anapc1 |
| XM_026939278.2 | mRNA | upstream | 12911 | 25923030 ~ 25966974 (-) | True | anapc1 |
| XM_026939525.2 | mRNA | upstream | 91311 | 26001430 ~ 26006094 (-) | False | LOC113542170 |
| XM_026939524.2 | mRNA | upstream | 91311 | 26001430 ~ 26004309 (-) | False | LOC113542170 |
| XM_026939523.2 | mRNA | upstream | 93020 | 26003139 ~ 26011780 (-) | True | LOC113542170 |
| XR_004577835.1 | other | downstream | 1174131 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_003404244.2 | other | downstream | 1258171 | 24453119 ~ 24651847 (-) | False | lyst |
| XR_004577838.1 | other | downstream | 1258171 | 24471703 ~ 24651847 (-) | False | lyst |
| XR_004577819.1 | other | downstream | 1869918 | 24017264 ~ 24040100 (-) | False | mlh1 |
| TU60979 | other | downstream | 2455801 | 23447908 ~ 23454217 (-) | True | G51576 |
| TU63465 | other | upstream | 1627657 | 27537776 ~ 27541299 (-) | False | zgc:163080 |
| TU64047 | other | upstream | 2523101 | 28433220 ~ 28435411 (-) | True | G54269 |
| trnae-cuc_11 | other | upstream | 3291813 | 29201932 ~ 29202003 (-) | True | trnae-cuc_11 |
| LOC113541988 | other | upstream | 3769292 | 29679411 ~ 29681726 (-) | True | LOC113541988 |
| TU65059 | other | upstream | 4201712 | 30111831 ~ 30122655 (-) | True | G55209 |
