Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnae-cuc_11 |
| length | 72 |
| RNA type | tRNA |
| GC content | 0.64 |
| exon number | 1 |
| gene id | trnae-cuc_11 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 29201932 ~ 29202003 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU64569 | lncRNA | downstream | 66263 | 29133880 ~ 29135669 (-) | True | G54775 |
| XR_004577809.1 | lncRNA | downstream | 119966 | 29077310 ~ 29081966 (-) | True | LOC117596831 |
| XR_004577853.1 | lncRNA | downstream | 193129 | 29003280 ~ 29008803 (-) | True | LOC117596864 |
| TU64108 | lncRNA | downstream | 704044 | 28496771 ~ 28497888 (-) | True | G54327 |
| TU64103 | lncRNA | downstream | 716687 | 28484982 ~ 28485245 (-) | True | G54324 |
| TU64653 | lncRNA | upstream | 60757 | 29262760 ~ 29263429 (-) | True | G54855 |
| XR_003404254.2 | lncRNA | upstream | 67093 | 29269096 ~ 29270020 (-) | True | LOC113542069 |
| XR_003404243.2 | lncRNA | upstream | 428998 | 29631001 ~ 29639339 (-) | True | LOC113542002 |
| TU64755 | lncRNA | upstream | 429018 | 29631021 ~ 29639350 (-) | False | LOC113542002 |
| TU64754 | lncRNA | upstream | 436583 | 29638586 ~ 29639350 (-) | False | LOC113542002 |
| XM_026939311.2 | mRNA | downstream | 581907 | 28610623 ~ 28620025 (-) | True | flrt3 |
| XM_026939312.2 | mRNA | downstream | 681103 | 28515778 ~ 28520829 (-) | True | ephx5 |
| XM_026939483.2 | mRNA | downstream | 696655 | 28504100 ~ 28505277 (-) | True | LOC113542138 |
| XM_026939117.2 | mRNA | downstream | 700534 | 28499606 ~ 28501398 (-) | True | LOC113541930 |
| XM_026939251.2 | mRNA | downstream | 705330 | 28494642 ~ 28496602 (-) | True | LOC113542015 |
| XM_034301980.1 | mRNA | upstream | 480542 | 29682545 ~ 29684864 (-) | True | LOC113541985 |
| XM_026939190.2 | mRNA | upstream | 484727 | 29686730 ~ 29695063 (-) | True | zfyve21 |
| XM_026939191.2 | mRNA | upstream | 484727 | 29686730 ~ 29695056 (-) | False | zfyve21 |
| XM_034303164.1 | mRNA | upstream | 571382 | 29773385 ~ 29779069 (-) | True | dact2 |
| XM_026939507.2 | mRNA | upstream | 580260 | 29782263 ~ 29788784 (-) | True | eif3s6ip |
| TU64047 | other | downstream | 766521 | 28433220 ~ 28435411 (-) | True | G54269 |
| TU63465 | other | downstream | 1660633 | 27537776 ~ 27541299 (-) | False | zgc:163080 |
| XR_003404274.1 | other | downstream | 3291813 | 25910018 ~ 25910119 (-) | True | LOC113542183 |
| XR_004577835.1 | other | downstream | 4466045 | 24682246 ~ 24735887 (-) | False | herc4 |
| XR_003404244.2 | other | downstream | 4550085 | 24453119 ~ 24651847 (-) | False | lyst |
| LOC113541988 | other | upstream | 477408 | 29679411 ~ 29681726 (-) | True | LOC113541988 |
| TU65059 | other | upstream | 909828 | 30111831 ~ 30122655 (-) | True | G55209 |
| TU65057 | other | upstream | 910031 | 30112034 ~ 30122822 (-) | False | G55209 |
| TU65060 | other | upstream | 910319 | 30112322 ~ 30122655 (-) | False | G55209 |
| XR_004577811.1 | other | upstream | 950905 | 30152908 ~ 30161223 (-) | True | khdrbs1a |
