Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnag-gcc |
| length | 71 |
| RNA type | tRNA |
| GC content | 0.62 |
| exon number | 1 |
| gene id | trnag-gcc |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 11706935 ~ 11707005 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU52526 | lncRNA | upstream | 321771 | 11384792 ~ 11385164 (+) | True | G44463 |
| XR_003404586.2 | lncRNA | upstream | 388060 | 11317785 ~ 11318875 (+) | True | LOC113545104 |
| TU52456 | lncRNA | upstream | 409221 | 11297492 ~ 11297714 (+) | True | G44398 |
| TU52268 | lncRNA | upstream | 651081 | 11054078 ~ 11055854 (+) | True | G44221 |
| TU52269 | lncRNA | upstream | 653082 | 11053575 ~ 11053853 (+) | True | G44222 |
| TU52776 | lncRNA | downstream | 110723 | 11817728 ~ 11819947 (+) | True | G44704 |
| TU52856 | lncRNA | downstream | 247984 | 11954989 ~ 11995143 (+) | True | G44777 |
| TU52847 | lncRNA | downstream | 251535 | 11958540 ~ 11962186 (+) | True | G44768 |
| TU52933 | lncRNA | downstream | 319819 | 12026824 ~ 12027030 (+) | True | G44843 |
| TU52936 | lncRNA | downstream | 322629 | 12029634 ~ 12030106 (+) | True | G44846 |
| XM_026941962.2 | mRNA | upstream | 411955 | 11254621 ~ 11294980 (+) | True | hs3st1l1 |
| XM_026934587.2 | mRNA | upstream | 499073 | 11099593 ~ 11207862 (+) | True | dntt |
| XM_034302550.1 | mRNA | downstream | 38743 | 11745748 ~ 11766414 (+) | False | LOC113544122 |
| XM_034302552.1 | mRNA | downstream | 38744 | 11745749 ~ 11766414 (+) | False | LOC113544122 |
| XM_034302553.1 | mRNA | downstream | 38744 | 11745749 ~ 11766414 (+) | False | LOC113544122 |
| XM_034302549.1 | mRNA | downstream | 38744 | 11745749 ~ 11766414 (+) | False | LOC113544122 |
| XM_034302551.1 | mRNA | downstream | 38744 | 11745749 ~ 11763027 (+) | False | LOC113544122 |
| trnag-ccc | other | upstream | 115530 | 11591335 ~ 11591405 (+) | True | trnag-ccc |
| XR_004577793.1 | other | upstream | 535821 | 11099593 ~ 11171114 (+) | False | dntt |
| XR_004577889.1 | other | upstream | 1098231 | 10594574 ~ 10608704 (+) | False | LOC113543929 |
| TU52056 | other | upstream | 1148640 | 10552259 ~ 10558295 (+) | True | sprn |
| trnak-cuu | other | upstream | 3237239 | 8469624 ~ 8469696 (+) | False | trnak-cuu |
| XR_004577785.1 | other | downstream | 38744 | 11745749 ~ 11766414 (+) | False | LOC113544122 |
| trnay-gua | other | downstream | 929315 | 12636320 ~ 12636406 (+) | True | trnay-gua |
| TU53286 | other | downstream | 932831 | 12639836 ~ 12643195 (+) | False | LOC117596823 |
| trnat-ugu | other | downstream | 960809 | 12667814 ~ 12667886 (+) | True | trnat-ugu |
| XR_004577802.1 | other | downstream | 1222554 | 12929559 ~ 12936802 (+) | False | spef1 |
