Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnag-gcc_4 |
| length | 71 |
| RNA type | tRNA |
| GC content | 0.62 |
| exon number | 1 |
| gene id | trnag-gcc_4 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 30860436 ~ 30860506 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU65343 | lncRNA | downstream | 237231 | 30619177 ~ 30623205 (-) | True | G55449 |
| XR_004577790.1 | lncRNA | downstream | 242249 | 30593157 ~ 30618187 (-) | True | LOC113542125 |
| XR_004577791.1 | lncRNA | downstream | 242251 | 30593157 ~ 30618185 (-) | False | LOC113542125 |
| XR_003404263.2 | lncRNA | downstream | 242252 | 30571345 ~ 30618184 (-) | False | LOC113542125 |
| TU65916 | lncRNA | upstream | 462648 | 31323154 ~ 31323464 (-) | True | G55992 |
| TU66118 | lncRNA | upstream | 772589 | 31633095 ~ 31633326 (-) | True | G56173 |
| XR_004577870.1 | lncRNA | upstream | 796545 | 31657051 ~ 31675951 (-) | False | LOC117596876 |
| XR_004577871.1 | lncRNA | upstream | 796545 | 31657051 ~ 31675951 (-) | True | LOC117596876 |
| TU66258 | lncRNA | upstream | 826757 | 31687263 ~ 31687472 (-) | False | fndc5a |
| XM_026939161.2 | mRNA | downstream | 106758 | 30746232 ~ 30753678 (-) | True | LOC113541964 |
| XM_026939200.2 | mRNA | downstream | 140736 | 30705014 ~ 30719700 (-) | True | fam204a |
| XM_026939520.2 | mRNA | downstream | 218278 | 30623249 ~ 30642158 (-) | True | LOC113542166 |
| XM_026939476.2 | mRNA | downstream | 402316 | 30447258 ~ 30458120 (-) | False | LOC113542134 |
| XM_026939519.2 | mRNA | upstream | 60399 | 30920905 ~ 31006462 (-) | False | gfra1a |
| XM_026939518.2 | mRNA | upstream | 60399 | 30920905 ~ 31006462 (-) | True | gfra1a |
| XM_026939480.2 | mRNA | upstream | 162155 | 31022661 ~ 31025845 (-) | True | si:ch1073-126c3.2 |
| XM_034303155.1 | mRNA | upstream | 658534 | 31519040 ~ 31524900 (-) | True | LOC113541870 |
| XM_026939213.2 | mRNA | upstream | 685395 | 31545901 ~ 31548633 (-) | True | LOC113541990 |
| trnag-gcc_3 | other | downstream | 8429 | 30851937 ~ 30852007 (-) | True | trnag-gcc_3 |
| trnag-gcc_2 | other | downstream | 104960 | 30755406 ~ 30755476 (-) | True | trnag-gcc_2 |
| TU65130 | other | downstream | 515898 | 30340408 ~ 30344538 (-) | True | rsrp1 |
| XR_004577811.1 | other | downstream | 699213 | 30152908 ~ 30161223 (-) | True | khdrbs1a |
| XR_004577810.1 | other | downstream | 699213 | 30153487 ~ 30161223 (-) | False | khdrbs1a |
| XR_004577789.1 | other | upstream | 685854 | 31546360 ~ 31548633 (-) | False | LOC113541990 |
| TU66090 | other | upstream | 703049 | 31563555 ~ 31600685 (-) | True | G56150 |
| TU66257 | other | upstream | 967308 | 31827814 ~ 31829484 (-) | True | G56272 |
| TU66291 | other | upstream | 976676 | 31837182 ~ 31838235 (-) | True | G56303 |
| XR_004577843.1 | other | upstream | 1379095 | 32239601 ~ 32289607 (-) | False | brf1a |
