Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU197013 |
| length | 281 |
| lncRNA type | intronic |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G166380 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 15933157 ~ 15933437 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU196943 | lncRNA | downstream | 36587 | 15895667 ~ 15896570 (-) | True | G166319 |
| TU196899 | lncRNA | downstream | 86902 | 15664486 ~ 15846255 (-) | True | G166289 |
| TU196896 | lncRNA | downstream | 325635 | 15605903 ~ 15607522 (-) | True | G166286 |
| XR_004579032.1 | lncRNA | downstream | 442149 | 15481130 ~ 15491008 (-) | False | LOC113539013 |
| XR_003403894.2 | lncRNA | downstream | 447182 | 15481131 ~ 15485975 (-) | True | LOC113539013 |
| TU197027 | lncRNA | upstream | 66782 | 16000219 ~ 16000512 (-) | True | G166390 |
| TU197138 | lncRNA | upstream | 333792 | 16267229 ~ 16267515 (-) | True | G166484 |
| TU197311 | lncRNA | upstream | 511404 | 16444841 ~ 16446005 (-) | True | G166633 |
| TU197551 | lncRNA | upstream | 811169 | 16744606 ~ 16744822 (-) | True | G166865 |
| TU197619 | lncRNA | upstream | 905644 | 16839081 ~ 16861229 (-) | False | LOC113538645 |
| XM_034308030.1 | mRNA | downstream | 18447 | 15906357 ~ 15914710 (-) | True | egr2a |
| XM_026934535.2 | mRNA | downstream | 43619 | 15883398 ~ 15889538 (-) | True | rtkn2a |
| XM_026934171.2 | mRNA | downstream | 54813 | 15864120 ~ 15878344 (-) | True | zfyve28 |
| XM_026933793.2 | mRNA | downstream | 69529 | 15858730 ~ 15863628 (-) | False | nt5c1ab |
| XM_034307845.1 | mRNA | downstream | 70232 | 15858730 ~ 15862925 (-) | True | nt5c1ab |
| XM_026934497.2 | mRNA | upstream | 53649 | 15987086 ~ 15992896 (-) | True | ahsa1b |
| XM_034308383.1 | mRNA | upstream | 67625 | 16001062 ~ 16007423 (-) | False | si:dkey-229e3.2 |
| XM_026934496.2 | mRNA | upstream | 67625 | 16001062 ~ 16007418 (-) | True | si:dkey-229e3.2 |
| XM_034308068.1 | mRNA | upstream | 77040 | 16010477 ~ 16035433 (-) | True | eprs1 |
| XM_034307848.1 | mRNA | upstream | 186280 | 16119717 ~ 16136443 (-) | False | zgc:174356 |
| XR_003403876.2 | other | downstream | 170439 | 15720457 ~ 15762718 (-) | False | eml5 |
| XR_003403862.2 | other | downstream | 269662 | 15635086 ~ 15663495 (-) | False | ktn1 |
| XR_003403861.2 | other | downstream | 269662 | 15635086 ~ 15663495 (-) | False | ktn1 |
| TU196803 | other | downstream | 611153 | 15304623 ~ 15322004 (-) | False | pgfb |
| XR_004578922.1 | other | downstream | 815793 | 15109594 ~ 15117364 (-) | False | capn3a |
| XR_003403899.1 | other | upstream | 82915 | 16016352 ~ 16016484 (-) | True | LOC113539022 |
| XR_004578948.1 | other | upstream | 1312502 | 17245939 ~ 17247819 (-) | False | htr1b |
| XR_004578949.1 | other | upstream | 1312502 | 17245939 ~ 17247157 (-) | False | htr1b |
| TU198371 | other | upstream | 2372306 | 18305743 ~ 18316207 (-) | True | G167566 |
| TU198372 | other | upstream | 2372306 | 18305743 ~ 18316207 (-) | False | G167566 |
