Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU198855 |
| length | 536 |
| RNA type | TUCP |
| GC content | 0.49 |
| exon number | 2 |
| gene id | LOC113538624 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 18839615 ~ 18847696 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU198742 | lncRNA | downstream | 41110 | 18802441 ~ 18802693 (-) | True | G167883 |
| TU198652 | lncRNA | downstream | 242489 | 18600331 ~ 18601314 (-) | False | bahd1 |
| TU198648 | lncRNA | downstream | 246917 | 18596581 ~ 18596886 (-) | True | G167802 |
| TU198632 | lncRNA | downstream | 271910 | 18571503 ~ 18571893 (-) | True | G167786 |
| TU198626 | lncRNA | downstream | 279424 | 18563971 ~ 18564379 (-) | True | G167783 |
| XR_003403878.2 | lncRNA | upstream | 432582 | 19280278 ~ 19285841 (-) | True | LOC113538783 |
| TU199245 | lncRNA | upstream | 472142 | 19319838 ~ 19426679 (-) | True | G168304 |
| XR_003403864.2 | lncRNA | upstream | 593393 | 19441089 ~ 19449728 (-) | True | LOC113538592 |
| TU199297 | lncRNA | upstream | 646367 | 19494063 ~ 19498688 (-) | True | G168354 |
| TU199352 | lncRNA | upstream | 738646 | 19586342 ~ 19586548 (-) | True | G168399 |
| XM_026934260.2 | mRNA | downstream | 18582 | 18822276 ~ 18825221 (-) | True | haus2 |
| XM_026934259.2 | mRNA | downstream | 18831 | 18822276 ~ 18824972 (-) | False | haus2 |
| XM_026934258.2 | mRNA | downstream | 18831 | 18822276 ~ 18824972 (-) | False | haus2 |
| XM_026934262.2 | mRNA | downstream | 18831 | 18822276 ~ 18824972 (-) | False | haus2 |
| XM_026934459.2 | mRNA | downstream | 44374 | 18778480 ~ 18799429 (-) | False | rpap1 |
| XM_026934200.2 | mRNA | upstream | 9339 | 18857035 ~ 18866636 (-) | True | znf839 |
| XM_026934282.2 | mRNA | upstream | 24656 | 18872352 ~ 18881325 (-) | True | vsx2 |
| XM_026934283.2 | mRNA | upstream | 24656 | 18872352 ~ 18881322 (-) | False | vsx2 |
| XM_026934540.2 | mRNA | upstream | 40469 | 18888165 ~ 18900853 (-) | True | lin52 |
| XM_034308385.1 | mRNA | upstream | 49260 | 18896956 ~ 18900872 (-) | False | lin52 |
| TU198375 | other | downstream | 461348 | 18378897 ~ 18382455 (-) | False | gdf7 |
| TU198371 | other | downstream | 527596 | 18305743 ~ 18316207 (-) | True | G167566 |
| TU198372 | other | downstream | 527596 | 18305743 ~ 18316207 (-) | False | G167566 |
| XR_004578948.1 | other | downstream | 1595984 | 17245939 ~ 17247819 (-) | False | htr1b |
| XR_004578949.1 | other | downstream | 1596646 | 17245939 ~ 17247157 (-) | False | htr1b |
| TU198915 | other | upstream | 114012 | 18961708 ~ 18966613 (-) | True | G168015 |
| TU199357 | other | upstream | 742372 | 19590068 ~ 19594777 (-) | False | LOC113538862 |
| TU199706 | other | upstream | 1165883 | 20013579 ~ 20018694 (-) | True | srp14 |
| TU199915 | other | upstream | 1475068 | 20322764 ~ 20330744 (-) | True | gchfr |
| TU200198 | other | upstream | 1717233 | 20564929 ~ 20565799 (-) | True | G169119 |
