Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU199088 |
| length | 1197 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 4 |
| gene id | G168175 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 19523154 ~ 19524855 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU198910 | lncRNA | upstream | 544678 | 18977016 ~ 18978476 (+) | True | G168011 |
| TU198789 | lncRNA | upstream | 681544 | 18839609 ~ 18841610 (+) | True | G167913 |
| TU198785 | lncRNA | upstream | 685832 | 18837091 ~ 18837322 (+) | True | G167909 |
| TU198576 | lncRNA | upstream | 874592 | 18648355 ~ 18648562 (+) | True | G167735 |
| TU198571 | lncRNA | upstream | 879736 | 18642292 ~ 18643418 (+) | True | G167730 |
| TU199143 | lncRNA | downstream | 71568 | 19596423 ~ 19596967 (+) | True | G168207 |
| TU199117 | lncRNA | downstream | 158121 | 19682976 ~ 19687591 (+) | False | G168191 |
| TU199406 | lncRNA | downstream | 197925 | 19722780 ~ 19763345 (+) | False | LOC113538915 |
| TU199473 | lncRNA | downstream | 248035 | 19772890 ~ 19774666 (+) | True | G168504 |
| TU199571 | lncRNA | downstream | 363072 | 19887927 ~ 19888154 (+) | True | G168585 |
| XM_026934235.2 | mRNA | upstream | 30791 | 19477213 ~ 19492363 (+) | True | LOC113538831 |
| XM_034308096.1 | mRNA | upstream | 48468 | 19460183 ~ 19474686 (+) | True | gcfc2 |
| XM_034308097.1 | mRNA | upstream | 65595 | 19449741 ~ 19457559 (+) | True | ywhaqb |
| XM_034308098.1 | mRNA | upstream | 65595 | 19449796 ~ 19457559 (+) | False | ywhaqb |
| XM_034307823.1 | mRNA | upstream | 144380 | 19369055 ~ 19378774 (+) | True | dhx32b |
| XM_034308207.1 | mRNA | downstream | 95992 | 19620847 ~ 19630120 (+) | False | LOC113538896 |
| XM_034308209.1 | mRNA | downstream | 96004 | 19620859 ~ 19630120 (+) | False | LOC113538896 |
| XM_034308208.1 | mRNA | downstream | 96483 | 19621338 ~ 19630120 (+) | False | LOC113538896 |
| XM_026934326.2 | mRNA | downstream | 96492 | 19621347 ~ 19630120 (+) | True | LOC113538896 |
| XM_034308225.1 | mRNA | downstream | 121428 | 19646283 ~ 19669547 (+) | True | mthfd1b |
| XR_004578955.1 | other | upstream | 1151183 | 18330468 ~ 18371971 (+) | False | ldah |
| XR_003403895.1 | other | upstream | 1203078 | 18319970 ~ 18320076 (+) | True | LOC113539017 |
| XR_004579004.1 | other | upstream | 1597134 | 17925706 ~ 17926020 (+) | True | LOC117598336 |
| XR_004578941.1 | other | upstream | 1608167 | 17876601 ~ 17914987 (+) | True | kidins220a |
| TU197931 | other | upstream | 1816322 | 17700500 ~ 17706832 (+) | False | itgb1bp1 |
| TU199111 | other | downstream | 150058 | 19674913 ~ 19687591 (+) | True | G168191 |
| TU199113 | other | downstream | 154460 | 19679315 ~ 19687591 (+) | False | G168191 |
| XR_004578946.1 | other | downstream | 354880 | 19879735 ~ 19886509 (+) | True | zfyve19 |
| XR_004578926.1 | other | downstream | 388778 | 19913633 ~ 19922401 (+) | True | LOC113538658 |
| XR_004578927.1 | other | downstream | 388778 | 19913633 ~ 19914709 (+) | False | LOC113538658 |
