Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU199117 |
| length | 599 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G168191 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 19674913 ~ 19687591 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU199143 | lncRNA | upstream | 86009 | 19596423 ~ 19596967 (+) | True | G168207 |
| TU199088 | lncRNA | upstream | 158121 | 19523154 ~ 19524855 (+) | True | G168175 |
| TU198910 | lncRNA | upstream | 704500 | 18977016 ~ 18978476 (+) | True | G168011 |
| TU198789 | lncRNA | upstream | 841366 | 18839609 ~ 18841610 (+) | True | G167913 |
| TU198785 | lncRNA | upstream | 845654 | 18837091 ~ 18837322 (+) | True | G167909 |
| TU199406 | lncRNA | downstream | 35189 | 19722780 ~ 19763345 (+) | False | LOC113538915 |
| TU199473 | lncRNA | downstream | 85299 | 19772890 ~ 19774666 (+) | True | G168504 |
| TU199571 | lncRNA | downstream | 200336 | 19887927 ~ 19888154 (+) | True | G168585 |
| TU199619 | lncRNA | downstream | 300057 | 19987648 ~ 19987870 (+) | True | G168630 |
| TU199621 | lncRNA | downstream | 331170 | 20018761 ~ 20019038 (+) | True | G168632 |
| XM_034308225.1 | mRNA | upstream | 13429 | 19646283 ~ 19669547 (+) | True | mthfd1b |
| XM_034308207.1 | mRNA | upstream | 52856 | 19620847 ~ 19630120 (+) | False | LOC113538896 |
| XM_034308209.1 | mRNA | upstream | 52856 | 19620859 ~ 19630120 (+) | False | LOC113538896 |
| XM_034308208.1 | mRNA | upstream | 52856 | 19621338 ~ 19630120 (+) | False | LOC113538896 |
| XM_026934326.2 | mRNA | upstream | 52856 | 19621347 ~ 19630120 (+) | True | LOC113538896 |
| XM_034308156.1 | mRNA | downstream | 36319 | 19723910 ~ 19766581 (+) | True | LOC113538915 |
| XM_026934352.2 | mRNA | downstream | 36319 | 19723910 ~ 19766581 (+) | False | LOC113538915 |
| XM_026934353.2 | mRNA | downstream | 38872 | 19726463 ~ 19766581 (+) | False | LOC113538915 |
| XM_026933767.2 | mRNA | downstream | 90977 | 19778568 ~ 19809259 (+) | True | plcb2 |
| XM_026934292.2 | mRNA | downstream | 149667 | 19837258 ~ 19839847 (+) | True | LOC113538872 |
| XR_004578955.1 | other | upstream | 1311005 | 18330468 ~ 18371971 (+) | False | ldah |
| XR_003403895.1 | other | upstream | 1362900 | 18319970 ~ 18320076 (+) | True | LOC113539017 |
| XR_004579004.1 | other | upstream | 1756956 | 17925706 ~ 17926020 (+) | True | LOC117598336 |
| XR_004578941.1 | other | upstream | 1767989 | 17876601 ~ 17914987 (+) | True | kidins220a |
| TU197931 | other | upstream | 1976144 | 17700500 ~ 17706832 (+) | False | itgb1bp1 |
| XR_004578946.1 | other | downstream | 192144 | 19879735 ~ 19886509 (+) | True | zfyve19 |
| XR_004578926.1 | other | downstream | 226042 | 19913633 ~ 19922401 (+) | True | LOC113538658 |
| XR_004578927.1 | other | downstream | 226042 | 19913633 ~ 19914709 (+) | False | LOC113538658 |
| TU199644 | other | downstream | 354886 | 20042477 ~ 20042935 (+) | True | G168650 |
| XR_004578908.1 | other | downstream | 834004 | 20521595 ~ 20531222 (+) | False | LOC113530103 |
