Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU199353 |
| length | 795 |
| lncRNA type | sense_over |
| GC content | 0.48 |
| exon number | 2 |
| gene id | gpx2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 19586924 ~ 19588902 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU199352 | lncRNA | downstream | 516 | 19586342 ~ 19586548 (-) | True | G168399 |
| TU199297 | lncRNA | downstream | 88376 | 19494063 ~ 19498688 (-) | True | G168354 |
| XR_003403864.2 | lncRNA | downstream | 137336 | 19441089 ~ 19449728 (-) | True | LOC113538592 |
| TU199245 | lncRNA | downstream | 160385 | 19319838 ~ 19426679 (-) | True | G168304 |
| XR_003403878.2 | lncRNA | downstream | 301223 | 19280278 ~ 19285841 (-) | True | LOC113538783 |
| TU199359 | lncRNA | upstream | 9679 | 19598368 ~ 19598898 (-) | True | G168405 |
| TU199356 | lncRNA | upstream | 11441 | 19600130 ~ 19609745 (-) | True | LOC113538763 |
| XR_004578996.1 | lncRNA | upstream | 90808 | 19679497 ~ 19680212 (-) | False | LOC117598328 |
| TU199395 | lncRNA | upstream | 90808 | 19679497 ~ 19680669 (-) | True | LOC117598328 |
| XR_004578988.1 | lncRNA | upstream | 94550 | 19683239 ~ 19684146 (-) | True | LOC117598314 |
| XM_026933921.2 | mRNA | downstream | 3814 | 19528667 ~ 19583250 (-) | False | LOC113538672 |
| XM_026933922.2 | mRNA | downstream | 3814 | 19528667 ~ 19583250 (-) | True | LOC113538672 |
| XM_026933923.2 | mRNA | downstream | 27099 | 19528667 ~ 19559965 (-) | False | LOC113538672 |
| XM_026933699.2 | mRNA | downstream | 62196 | 19498748 ~ 19524868 (-) | False | LOC113538555 |
| XM_026933698.2 | mRNA | downstream | 62196 | 19498748 ~ 19524868 (-) | True | LOC113538555 |
| XM_034307868.1 | mRNA | upstream | 679 | 19589368 ~ 19595214 (-) | True | LOC113538862 |
| XM_026934271.2 | mRNA | upstream | 679 | 19589368 ~ 19595204 (-) | False | LOC113538862 |
| XM_034307869.1 | mRNA | upstream | 679 | 19589368 ~ 19594582 (-) | False | LOC113538862 |
| XM_026934113.2 | mRNA | upstream | 12109 | 19600798 ~ 19609778 (-) | False | LOC113538763 |
| XM_026934114.2 | mRNA | upstream | 12109 | 19600798 ~ 19609774 (-) | False | LOC113538763 |
| TU198915 | other | downstream | 620451 | 18961708 ~ 18966613 (-) | True | G168015 |
| TU198855 | other | downstream | 739368 | 18843803 ~ 18847696 (-) | False | LOC113538624 |
| TU198375 | other | downstream | 1204609 | 18378897 ~ 18382455 (-) | False | gdf7 |
| TU198371 | other | downstream | 1270857 | 18305743 ~ 18316207 (-) | True | G167566 |
| TU199357 | other | upstream | 1379 | 19590068 ~ 19594777 (-) | False | LOC113538862 |
| TU199706 | other | upstream | 424890 | 20013579 ~ 20018694 (-) | True | srp14 |
| TU199915 | other | upstream | 734075 | 20322764 ~ 20330744 (-) | True | gchfr |
| TU200198 | other | upstream | 976240 | 20564929 ~ 20565799 (-) | True | G169119 |
| XR_003403127.1 | other | upstream | 1144241 | 20732930 ~ 20733052 (-) | True | LOC113530231 |
