Item | Value |
---|---|
RNA id | TU199619 |
length | 223 |
lncRNA type | inter_gene |
GC content | 0.40 |
exon number | 1 |
gene id | G168630 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047604.1 |
NCBI id | CM018550.1 |
chromosome length | 29376037 |
location | 19987648 ~ 19987870 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU199571 | lncRNA | upstream | 99494 | 19887927 ~ 19888154 (+) | True | G168585 |
TU199473 | lncRNA | upstream | 212982 | 19772890 ~ 19774666 (+) | True | G168504 |
TU199406 | lncRNA | upstream | 224303 | 19722780 ~ 19763345 (+) | False | LOC113538915 |
TU199117 | lncRNA | upstream | 300057 | 19682976 ~ 19687591 (+) | False | G168191 |
TU199143 | lncRNA | upstream | 390681 | 19596423 ~ 19596967 (+) | True | G168207 |
TU199621 | lncRNA | downstream | 30891 | 20018761 ~ 20019038 (+) | True | G168632 |
TU199622 | lncRNA | downstream | 31287 | 20019157 ~ 20020371 (+) | True | G168633 |
TU199623 | lncRNA | downstream | 32764 | 20020634 ~ 20021068 (+) | True | G168634 |
TU199624 | lncRNA | downstream | 34512 | 20022382 ~ 20022838 (+) | True | G168635 |
TU199625 | lncRNA | downstream | 35080 | 20022950 ~ 20023528 (+) | True | G168636 |
XM_034307796.1 | mRNA | upstream | 3407 | 19941911 ~ 19984241 (+) | True | LOC113538714 |
XM_034307797.1 | mRNA | upstream | 3407 | 19941913 ~ 19984241 (+) | False | LOC113538714 |
XM_026934008.2 | mRNA | upstream | 3407 | 19941913 ~ 19984241 (+) | False | LOC113538714 |
XM_026934010.2 | mRNA | upstream | 3407 | 19941913 ~ 19984241 (+) | False | LOC113538714 |
XM_026934009.2 | mRNA | upstream | 3407 | 19941914 ~ 19984241 (+) | False | LOC113538714 |
XM_026934419.2 | mRNA | downstream | 614 | 19988484 ~ 20014894 (+) | True | xgb |
XM_026934514.2 | mRNA | downstream | 154844 | 20142714 ~ 20148008 (+) | False | zbtb42 |
XM_026934515.2 | mRNA | downstream | 155731 | 20143601 ~ 20148008 (+) | True | zbtb42 |
XM_034308323.1 | mRNA | downstream | 273738 | 20261608 ~ 20313158 (+) | False | dnajc17 |
XM_026918653.2 | mRNA | downstream | 274491 | 20262361 ~ 20313158 (+) | True | dnajc17 |
XR_004578926.1 | other | upstream | 65247 | 19913633 ~ 19922401 (+) | True | LOC113538658 |
XR_004578927.1 | other | upstream | 72939 | 19913633 ~ 19914709 (+) | False | LOC113538658 |
XR_004578946.1 | other | upstream | 101139 | 19879735 ~ 19886509 (+) | True | zfyve19 |
TU199111 | other | upstream | 300057 | 19674913 ~ 19687591 (+) | True | G168191 |
TU199113 | other | upstream | 300057 | 19679315 ~ 19687591 (+) | False | G168191 |
TU199644 | other | downstream | 54607 | 20042477 ~ 20042935 (+) | True | G168650 |
XR_004578908.1 | other | downstream | 533725 | 20521595 ~ 20531222 (+) | False | LOC113530103 |
XR_004578910.1 | other | downstream | 533725 | 20521595 ~ 20531222 (+) | False | LOC113530103 |
XR_004578911.1 | other | downstream | 533725 | 20521595 ~ 20531222 (+) | False | LOC113530103 |
XR_004578909.1 | other | downstream | 533725 | 20521595 ~ 20531222 (+) | False | LOC113530103 |