Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU199623 |
| length | 435 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G168634 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 20020634 ~ 20021068 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU199622 | lncRNA | upstream | 263 | 20019157 ~ 20020371 (+) | True | G168633 |
| TU199621 | lncRNA | upstream | 1596 | 20018761 ~ 20019038 (+) | True | G168632 |
| TU199619 | lncRNA | upstream | 32764 | 19987648 ~ 19987870 (+) | True | G168630 |
| TU199571 | lncRNA | upstream | 132480 | 19887927 ~ 19888154 (+) | True | G168585 |
| TU199473 | lncRNA | upstream | 245968 | 19772890 ~ 19774666 (+) | True | G168504 |
| TU199624 | lncRNA | downstream | 1314 | 20022382 ~ 20022838 (+) | True | G168635 |
| TU199625 | lncRNA | downstream | 1882 | 20022950 ~ 20023528 (+) | True | G168636 |
| TU199627 | lncRNA | downstream | 3264 | 20024332 ~ 20025252 (+) | True | G168638 |
| TU199629 | lncRNA | downstream | 5038 | 20026106 ~ 20027974 (+) | False | G168639 |
| TU199630 | lncRNA | downstream | 5038 | 20026106 ~ 20028336 (+) | True | G168639 |
| XM_026934419.2 | mRNA | upstream | 5740 | 19988484 ~ 20014894 (+) | True | xgb |
| XM_026934008.2 | mRNA | upstream | 36393 | 19941913 ~ 19984241 (+) | False | LOC113538714 |
| XM_026934514.2 | mRNA | downstream | 121646 | 20142714 ~ 20148008 (+) | False | zbtb42 |
| XM_026934515.2 | mRNA | downstream | 122533 | 20143601 ~ 20148008 (+) | True | zbtb42 |
| XM_034308323.1 | mRNA | downstream | 240540 | 20261608 ~ 20313158 (+) | False | dnajc17 |
| XM_026918653.2 | mRNA | downstream | 241293 | 20262361 ~ 20313158 (+) | True | dnajc17 |
| XM_034307749.1 | mRNA | downstream | 344106 | 20365174 ~ 20444472 (+) | True | fsip1 |
| XR_004578926.1 | other | upstream | 98233 | 19913633 ~ 19922401 (+) | True | LOC113538658 |
| XR_004578927.1 | other | upstream | 105925 | 19913633 ~ 19914709 (+) | False | LOC113538658 |
| XR_004578946.1 | other | upstream | 134125 | 19879735 ~ 19886509 (+) | True | zfyve19 |
| TU199111 | other | upstream | 333043 | 19674913 ~ 19687591 (+) | True | G168191 |
| TU199113 | other | upstream | 333043 | 19679315 ~ 19687591 (+) | False | G168191 |
| TU199644 | other | downstream | 21409 | 20042477 ~ 20042935 (+) | True | G168650 |
| XR_004578908.1 | other | downstream | 500527 | 20521595 ~ 20531222 (+) | False | LOC113530103 |
| XR_004578910.1 | other | downstream | 500527 | 20521595 ~ 20531222 (+) | False | LOC113530103 |
| XR_004578911.1 | other | downstream | 500527 | 20521595 ~ 20531222 (+) | False | LOC113530103 |
| XR_004578909.1 | other | downstream | 500527 | 20521595 ~ 20531222 (+) | False | LOC113530103 |
