Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026934420.2 |
| length | 1130 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 5 |
| gene id | srp14 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 20013579 ~ 20018717 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | biological_process |
| GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | cellular_component |
| GO:0030942 | endoplasmic reticulum signal peptide binding | molecular_function |
| GO:0008312 | 7S RNA binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU199664 | lncRNA | downstream | 74439 | 19939816 ~ 19940040 (-) | True | G168665 |
| TU199660 | lncRNA | downstream | 90292 | 19923105 ~ 19924187 (-) | True | G168661 |
| TU199596 | lncRNA | downstream | 126649 | 19887315 ~ 19887830 (-) | True | G168608 |
| TU199462 | lncRNA | downstream | 247526 | 19766754 ~ 19766953 (-) | True | G168493 |
| TU199433 | lncRNA | downstream | 248752 | 19763846 ~ 19765727 (-) | True | G168466 |
| TU199749 | lncRNA | upstream | 80411 | 20099127 ~ 20100572 (-) | True | G168747 |
| TU199752 | lncRNA | upstream | 87497 | 20106213 ~ 20106858 (-) | True | G168750 |
| TU199758 | lncRNA | upstream | 126551 | 20145267 ~ 20148736 (-) | True | G168756 |
| TU199760 | lncRNA | upstream | 130774 | 20149490 ~ 20149902 (-) | True | G168758 |
| TU199761 | lncRNA | upstream | 131577 | 20150293 ~ 20151303 (-) | True | G168759 |
| XM_026934191.2 | mRNA | downstream | 105732 | 19891594 ~ 19908747 (-) | True | zgc:162989 |
| XM_034307953.1 | mRNA | downstream | 106136 | 19901968 ~ 19908343 (-) | False | zgc:162989 |
| XM_026934190.2 | mRNA | downstream | 106230 | 19901968 ~ 19908249 (-) | False | zgc:162989 |
| XM_026933817.2 | mRNA | downstream | 135144 | 19873422 ~ 19879335 (-) | True | bub1bb |
| XM_026934335.2 | mRNA | downstream | 147314 | 19840371 ~ 19867165 (-) | False | LOC113538902 |
| XM_026933801.2 | mRNA | upstream | 503 | 20019219 ~ 20025636 (-) | True | LOC113538610 |
| XM_034308017.1 | mRNA | upstream | 8577 | 20027293 ~ 20059002 (-) | False | cep170b |
| XM_034308018.1 | mRNA | upstream | 8577 | 20027293 ~ 20059002 (-) | False | cep170b |
| XM_034308019.1 | mRNA | upstream | 8577 | 20027293 ~ 20059001 (-) | False | cep170b |
| XM_026933905.2 | mRNA | upstream | 8577 | 20027293 ~ 20059001 (-) | False | cep170b |
| TU199357 | other | downstream | 419702 | 19590068 ~ 19594777 (-) | False | LOC113538862 |
| TU198915 | other | downstream | 1047866 | 18961708 ~ 18966613 (-) | True | G168015 |
| TU198855 | other | downstream | 1166783 | 18843803 ~ 18847696 (-) | False | LOC113538624 |
| TU198375 | other | downstream | 1632024 | 18378897 ~ 18382455 (-) | False | gdf7 |
| TU198372 | other | downstream | 1698272 | 18305743 ~ 18316207 (-) | False | G167566 |
| TU199915 | other | upstream | 304048 | 20322764 ~ 20330744 (-) | True | gchfr |
| TU200198 | other | upstream | 546213 | 20564929 ~ 20565799 (-) | True | G169119 |
| XR_003403127.1 | other | upstream | 714214 | 20732930 ~ 20733052 (-) | True | LOC113530231 |
| TU200304 | other | upstream | 795845 | 20814561 ~ 20817216 (-) | False | grem1b |
| TU201211 | other | upstream | 2096849 | 22115565 ~ 22115876 (-) | True | G170023 |
