Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU199853 |
| length | 437 |
| lncRNA type | sense_over |
| GC content | 0.34 |
| exon number | 2 |
| gene id | fsip1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 20365174 ~ 20453805 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU199855 | lncRNA | upstream | 311 | 20443790 ~ 20443933 (+) | False | fsip1 |
| TU199869 | lncRNA | upstream | 1612 | 20442375 ~ 20442632 (+) | True | G168850 |
| XR_004579010.1 | lncRNA | upstream | 95412 | 20347540 ~ 20348832 (+) | True | LOC117598343 |
| XR_004578952.1 | lncRNA | upstream | 205605 | 20237101 ~ 20238639 (+) | True | LOC117598257 |
| TU199791 | lncRNA | upstream | 234651 | 20207984 ~ 20209593 (+) | True | G168783 |
| TU199991 | lncRNA | downstream | 116071 | 20569876 ~ 20572563 (+) | True | G168938 |
| TU199993 | lncRNA | downstream | 119227 | 20573032 ~ 20573278 (+) | True | G168940 |
| TU200100 | lncRNA | downstream | 287539 | 20741344 ~ 20823383 (+) | True | G169045 |
| TU200101 | lncRNA | downstream | 379041 | 20832846 ~ 20842174 (+) | False | G169046 |
| TU200106 | lncRNA | downstream | 379041 | 20832846 ~ 20842174 (+) | False | G169046 |
| XM_034308323.1 | mRNA | upstream | 131086 | 20261608 ~ 20313158 (+) | False | dnajc17 |
| XM_026918653.2 | mRNA | upstream | 131086 | 20262361 ~ 20313158 (+) | True | dnajc17 |
| XM_026934514.2 | mRNA | upstream | 296236 | 20142714 ~ 20148008 (+) | False | zbtb42 |
| XM_026934515.2 | mRNA | upstream | 296236 | 20143601 ~ 20148008 (+) | True | zbtb42 |
| XM_026934419.2 | mRNA | upstream | 429350 | 19988484 ~ 20014894 (+) | True | xgb |
| XM_034307746.1 | mRNA | downstream | 67790 | 20521595 ~ 20526854 (+) | True | LOC113530103 |
| XM_026919862.2 | mRNA | downstream | 81251 | 20535056 ~ 20540298 (+) | True | LOC113530108 |
| XM_026919861.2 | mRNA | downstream | 87093 | 20540898 ~ 20544512 (+) | True | zgc:194887 |
| XM_034308304.1 | mRNA | downstream | 285114 | 20738919 ~ 20813729 (+) | True | LOC113529967 |
| XM_026918989.2 | mRNA | downstream | 389993 | 20843798 ~ 20896411 (+) | False | eif2ak4 |
| TU199644 | other | upstream | 401309 | 20042477 ~ 20042935 (+) | True | G168650 |
| XR_004578926.1 | other | upstream | 521843 | 19913633 ~ 19922401 (+) | True | LOC113538658 |
| XR_004578927.1 | other | upstream | 529535 | 19913633 ~ 19914709 (+) | False | LOC113538658 |
| XR_004578946.1 | other | upstream | 557735 | 19879735 ~ 19886509 (+) | True | zfyve19 |
| TU199113 | other | upstream | 756653 | 19679315 ~ 19687591 (+) | False | G168191 |
| XR_004578908.1 | other | downstream | 67790 | 20521595 ~ 20531222 (+) | False | LOC113530103 |
| XR_004578910.1 | other | downstream | 67790 | 20521595 ~ 20531222 (+) | False | LOC113530103 |
| XR_004578911.1 | other | downstream | 67790 | 20521595 ~ 20531222 (+) | False | LOC113530103 |
| XR_004578909.1 | other | downstream | 67790 | 20521595 ~ 20531222 (+) | False | LOC113530103 |
| XR_004578906.1 | other | downstream | 67790 | 20521595 ~ 20527951 (+) | False | LOC113530103 |
