Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU199937 |
| length | 776 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G168908 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 20442997 ~ 20443772 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU199899 | lncRNA | downstream | 141443 | 20298541 ~ 20301554 (-) | False | LOC113529462 |
| TU199761 | lncRNA | downstream | 291694 | 20150293 ~ 20151303 (-) | True | G168759 |
| TU199760 | lncRNA | downstream | 293095 | 20149490 ~ 20149902 (-) | True | G168758 |
| TU199758 | lncRNA | downstream | 294261 | 20145267 ~ 20148736 (-) | True | G168756 |
| TU199752 | lncRNA | downstream | 336139 | 20106213 ~ 20106858 (-) | True | G168750 |
| TU200177 | lncRNA | upstream | 95090 | 20538862 ~ 20540283 (-) | True | G169104 |
| TU200182 | lncRNA | upstream | 103873 | 20547645 ~ 20547877 (-) | True | G169109 |
| TU200196 | lncRNA | upstream | 120383 | 20564155 ~ 20564706 (-) | True | G169118 |
| TU200194 | lncRNA | upstream | 120684 | 20564456 ~ 20564828 (-) | False | G169118 |
| TU200211 | lncRNA | upstream | 129635 | 20573407 ~ 20573613 (-) | True | G169126 |
| XM_034307745.1 | mRNA | downstream | 70894 | 20369134 ~ 20372103 (-) | True | LOC113530110 |
| XM_034308391.1 | mRNA | downstream | 112251 | 20323514 ~ 20330746 (-) | False | gchfr |
| XM_026920020.2 | mRNA | downstream | 112251 | 20323514 ~ 20330746 (-) | False | gchfr |
| XM_026918654.2 | mRNA | downstream | 141448 | 20298511 ~ 20301549 (-) | True | LOC113529462 |
| XM_026919034.2 | mRNA | downstream | 187122 | 20233453 ~ 20255875 (-) | False | inf2 |
| XM_026919852.2 | mRNA | upstream | 423 | 20444195 ~ 20453800 (-) | False | LOC113530102 |
| XM_026919850.2 | mRNA | upstream | 423 | 20444195 ~ 20453800 (-) | True | LOC113530102 |
| XM_026919859.2 | mRNA | upstream | 57377 | 20501149 ~ 20521426 (-) | True | acp7 |
| XM_034307752.1 | mRNA | upstream | 57377 | 20501149 ~ 20520386 (-) | False | acp7 |
| XM_034307751.1 | mRNA | upstream | 57377 | 20501149 ~ 20518356 (-) | False | acp7 |
| TU199915 | other | downstream | 112253 | 20322764 ~ 20330744 (-) | True | gchfr |
| TU199706 | other | downstream | 424303 | 20013579 ~ 20018694 (-) | True | srp14 |
| TU199357 | other | downstream | 848220 | 19590068 ~ 19594777 (-) | False | LOC113538862 |
| TU198915 | other | downstream | 1476384 | 18961708 ~ 18966613 (-) | True | G168015 |
| TU198855 | other | downstream | 1595301 | 18843803 ~ 18847696 (-) | False | LOC113538624 |
| TU200198 | other | upstream | 121157 | 20564929 ~ 20565799 (-) | True | G169119 |
| XR_003403127.1 | other | upstream | 289158 | 20732930 ~ 20733052 (-) | True | LOC113530231 |
| TU200304 | other | upstream | 370789 | 20814561 ~ 20817216 (-) | False | grem1b |
| TU201211 | other | upstream | 1671793 | 22115565 ~ 22115876 (-) | True | G170023 |
| TU201673 | other | upstream | 2411722 | 22855494 ~ 22863767 (-) | True | G170435 |
