Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU200432 |
| length | 713 |
| lncRNA type | sense_over |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G169320 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 21191166 ~ 21196292 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU200384 | lncRNA | upstream | 7388 | 21181857 ~ 21183778 (+) | True | G169287 |
| XR_004579003.1 | lncRNA | upstream | 83767 | 21104943 ~ 21107399 (+) | True | LOC117598333 |
| TU200101 | lncRNA | upstream | 348992 | 20832846 ~ 20842174 (+) | False | G169046 |
| TU200106 | lncRNA | upstream | 348992 | 20832846 ~ 20842174 (+) | False | G169046 |
| TU200109 | lncRNA | upstream | 348992 | 20832846 ~ 20842174 (+) | True | G169046 |
| TU200673 | lncRNA | downstream | 342958 | 21539250 ~ 21539498 (+) | True | G169543 |
| TU200723 | lncRNA | downstream | 455349 | 21651641 ~ 21651902 (+) | True | G169575 |
| TU200820 | lncRNA | downstream | 564501 | 21760793 ~ 21761231 (+) | False | im:7136021 |
| TU200832 | lncRNA | downstream | 571872 | 21768164 ~ 21768718 (+) | True | G169652 |
| XR_004578967.1 | lncRNA | downstream | 645324 | 21841616 ~ 21843598 (+) | True | LOC117598284 |
| XM_026919026.2 | mRNA | upstream | 9607 | 21144875 ~ 21181559 (+) | True | tecpr2 |
| XM_026918986.2 | mRNA | upstream | 294755 | 20845104 ~ 20896411 (+) | False | eif2ak4 |
| XM_026918987.2 | mRNA | upstream | 294755 | 20845104 ~ 20896411 (+) | False | eif2ak4 |
| XM_026918988.2 | mRNA | upstream | 295561 | 20845104 ~ 20895605 (+) | True | eif2ak4 |
| XM_034307769.1 | mRNA | upstream | 310501 | 20845103 ~ 20880665 (+) | False | eif2ak4 |
| XM_034308204.1 | mRNA | downstream | 36 | 21196328 ~ 21205161 (+) | False | rcor1 |
| XM_026918799.2 | mRNA | downstream | 12030 | 21208322 ~ 21223633 (+) | True | traf3 |
| XM_026918801.2 | mRNA | downstream | 34633 | 21230925 ~ 21246855 (+) | True | ehd4 |
| XM_034307941.1 | mRNA | downstream | 53993 | 21250285 ~ 21289808 (+) | True | sptbn5 |
| XM_034307942.1 | mRNA | downstream | 53993 | 21250285 ~ 21282946 (+) | False | sptbn5 |
| XR_004578912.1 | other | upstream | 659944 | 20528519 ~ 20531222 (+) | False | LOC113530103 |
| XR_004578913.1 | other | upstream | 659944 | 20528525 ~ 20531222 (+) | False | LOC113530103 |
| XR_004578914.1 | other | upstream | 659944 | 20528527 ~ 20531222 (+) | False | LOC113530103 |
| XR_004578905.1 | other | upstream | 663215 | 20521595 ~ 20527951 (+) | False | LOC113530103 |
| TU200725 | other | downstream | 473615 | 21669907 ~ 21674461 (+) | True | G169577 |
| TU200872 | other | downstream | 622989 | 21819281 ~ 21820059 (+) | True | G169692 |
| XR_004578924.1 | other | downstream | 1665515 | 22861807 ~ 23022395 (+) | False | LOC113533992 |
| XR_004578925.1 | other | downstream | 1665518 | 22861810 ~ 23022395 (+) | False | LOC113533992 |
| TU201530 | other | downstream | 1665735 | 22862027 ~ 22890770 (+) | True | LOC113533992 |
