Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU200563 |
| length | 215 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G169435 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 21318226 ~ 21318440 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU200552 | lncRNA | downstream | 13689 | 21304206 ~ 21304537 (-) | True | G169424 |
| XR_003403066.2 | lncRNA | downstream | 76589 | 21239050 ~ 21241637 (-) | False | LOC113529548 |
| TU200477 | lncRNA | downstream | 76596 | 21230943 ~ 21241630 (-) | True | LOC113529548 |
| TU200479 | lncRNA | downstream | 76596 | 21238934 ~ 21241630 (-) | False | LOC113529548 |
| TU200372 | lncRNA | downstream | 198601 | 21088426 ~ 21119625 (-) | False | bmf1 |
| TU200582 | lncRNA | upstream | 50000 | 21368440 ~ 21373041 (-) | True | G169454 |
| TU200770 | lncRNA | upstream | 187995 | 21506435 ~ 21514361 (-) | True | LOC113529764 |
| XR_003403081.2 | lncRNA | upstream | 188953 | 21507393 ~ 21514989 (-) | False | LOC113529764 |
| TU200781 | lncRNA | upstream | 220861 | 21539301 ~ 21539545 (-) | True | G169611 |
| TU200827 | lncRNA | upstream | 442084 | 21760524 ~ 21762786 (-) | True | G169647 |
| XM_026919027.2 | mRNA | downstream | 135003 | 21181765 ~ 21183223 (-) | True | ankrd9 |
| XM_026919789.2 | mRNA | downstream | 211652 | 21088303 ~ 21106574 (-) | True | bmf1 |
| XM_026919986.2 | mRNA | upstream | 73206 | 21391646 ~ 21438109 (-) | False | prkd1 |
| XM_026919985.2 | mRNA | upstream | 73206 | 21391646 ~ 21438109 (-) | True | prkd1 |
| XM_034307838.1 | mRNA | upstream | 238643 | 21557083 ~ 21591367 (-) | False | strn3 |
| XM_034307837.1 | mRNA | upstream | 238643 | 21557083 ~ 21591364 (-) | False | strn3 |
| XM_034307836.1 | mRNA | upstream | 238643 | 21557083 ~ 21591363 (-) | True | strn3 |
| TU200304 | other | downstream | 501010 | 20814561 ~ 20817216 (-) | False | grem1b |
| XR_003403127.1 | other | downstream | 585174 | 20732930 ~ 20733052 (-) | True | LOC113530231 |
| TU200198 | other | downstream | 752427 | 20564929 ~ 20565799 (-) | True | G169119 |
| TU199915 | other | downstream | 987482 | 20322764 ~ 20330744 (-) | True | gchfr |
| TU199706 | other | downstream | 1299532 | 20013579 ~ 20018694 (-) | True | srp14 |
| TU201211 | other | upstream | 797125 | 22115565 ~ 22115876 (-) | True | G170023 |
| TU201673 | other | upstream | 1537054 | 22855494 ~ 22863767 (-) | True | G170435 |
| TU202681 | other | upstream | 3482643 | 24801083 ~ 24807095 (-) | False | G171256 |
| TU203072 | other | upstream | 3940399 | 25258839 ~ 25259209 (-) | False | G171569 |
| TU203074 | other | upstream | 3940399 | 25258839 ~ 25259362 (-) | True | G171569 |
