Item | Value |
---|---|
RNA id | TU200725 |
length | 709 |
RNA type | TUCP |
GC content | 0.47 |
exon number | 2 |
gene id | G169577 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047604.1 |
NCBI id | CM018550.1 |
chromosome length | 29376037 |
location | 21669907 ~ 21674461 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU200723 | lncRNA | upstream | 18005 | 21651641 ~ 21651902 (+) | True | G169575 |
TU200673 | lncRNA | upstream | 130409 | 21539250 ~ 21539498 (+) | True | G169543 |
TU200432 | lncRNA | upstream | 473615 | 21191166 ~ 21196292 (+) | True | G169320 |
TU200384 | lncRNA | upstream | 486129 | 21181857 ~ 21183778 (+) | True | G169287 |
XR_004579003.1 | lncRNA | upstream | 562508 | 21104943 ~ 21107399 (+) | True | LOC117598333 |
TU200820 | lncRNA | downstream | 86332 | 21760793 ~ 21761231 (+) | False | im:7136021 |
TU200832 | lncRNA | downstream | 93703 | 21768164 ~ 21768718 (+) | True | G169652 |
XR_004578967.1 | lncRNA | downstream | 167155 | 21841616 ~ 21843598 (+) | True | LOC117598284 |
TU201035 | lncRNA | downstream | 415013 | 22089474 ~ 22089698 (+) | True | G169850 |
TU201038 | lncRNA | downstream | 418525 | 22092986 ~ 22093240 (+) | True | G169853 |
XM_026919473.2 | mRNA | upstream | 71242 | 21590408 ~ 21598665 (+) | False | ap4s1 |
XM_026919469.2 | mRNA | upstream | 71242 | 21590409 ~ 21598665 (+) | True | ap4s1 |
XM_026919472.2 | mRNA | upstream | 71242 | 21590409 ~ 21598665 (+) | False | ap4s1 |
XM_026919470.2 | mRNA | upstream | 71242 | 21591518 ~ 21598665 (+) | False | ap4s1 |
XM_026919468.2 | mRNA | upstream | 113476 | 21550393 ~ 21556431 (+) | True | coch |
XM_034308104.1 | mRNA | downstream | 86310 | 21760771 ~ 21766373 (+) | True | im:7136021 |
XM_026919377.2 | mRNA | downstream | 86313 | 21760774 ~ 21766373 (+) | False | im:7136021 |
XM_034308084.1 | mRNA | downstream | 472665 | 22147126 ~ 22166909 (+) | False | LOC113529717 |
XM_034308085.1 | mRNA | downstream | 472984 | 22147445 ~ 22166909 (+) | False | LOC113529717 |
XM_034308086.1 | mRNA | downstream | 474240 | 22148701 ~ 22170590 (+) | False | LOC113529717 |
XR_004578908.1 | other | upstream | 1138685 | 20521595 ~ 20531222 (+) | False | LOC113530103 |
XR_004578910.1 | other | upstream | 1138685 | 20521595 ~ 20531222 (+) | False | LOC113530103 |
XR_004578911.1 | other | upstream | 1138685 | 20521595 ~ 20531222 (+) | False | LOC113530103 |
XR_004578909.1 | other | upstream | 1138685 | 20521595 ~ 20531222 (+) | False | LOC113530103 |
XR_004578912.1 | other | upstream | 1138685 | 20528519 ~ 20531222 (+) | False | LOC113530103 |
TU200872 | other | downstream | 144820 | 21819281 ~ 21820059 (+) | True | G169692 |
XR_004578924.1 | other | downstream | 1187346 | 22861807 ~ 23022395 (+) | False | LOC113533992 |
XR_004578925.1 | other | downstream | 1187349 | 22861810 ~ 23022395 (+) | False | LOC113533992 |
TU201530 | other | downstream | 1187566 | 22862027 ~ 22890770 (+) | True | LOC113533992 |
trnah-gug_10 | other | downstream | 2287523 | 23961984 ~ 23962055 (+) | True | trnah-gug_10 |