Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU201196 |
| length | 344 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G170008 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 22091960 ~ 22092303 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578965.1 | lncRNA | downstream | 94639 | 21992957 ~ 21997321 (-) | False | LOC113529722 |
| XR_003403078.2 | lncRNA | downstream | 94639 | 21992957 ~ 21997321 (-) | False | LOC113529722 |
| XR_003403079.2 | lncRNA | downstream | 94639 | 21992957 ~ 21997321 (-) | False | LOC113529722 |
| XR_003403077.2 | lncRNA | downstream | 94639 | 21992957 ~ 21997321 (-) | True | LOC113529722 |
| XR_004578966.1 | lncRNA | downstream | 99125 | 21991033 ~ 21992835 (-) | True | LOC117598283 |
| TU201205 | lncRNA | upstream | 19276 | 22111579 ~ 22111916 (-) | True | G170017 |
| TU201208 | lncRNA | upstream | 22092 | 22114395 ~ 22114750 (-) | True | G170020 |
| TU201320 | lncRNA | upstream | 163314 | 22255617 ~ 22256725 (-) | True | G170120 |
| TU201336 | lncRNA | upstream | 198178 | 22290481 ~ 22326447 (-) | True | G170129 |
| TU201664 | lncRNA | upstream | 673537 | 22765840 ~ 22767776 (-) | True | G170428 |
| XM_026919091.2 | mRNA | downstream | 3573 | 21781020 ~ 22088387 (-) | True | mdga2a |
| XM_026919373.2 | mRNA | downstream | 331659 | 21742755 ~ 21760301 (-) | True | mis18bp1 |
| XM_026919463.2 | mRNA | downstream | 354598 | 21652713 ~ 21737362 (-) | False | heatr5a |
| XM_034308090.1 | mRNA | upstream | 45391 | 22137694 ~ 22146800 (-) | True | pole2 |
| XM_034308091.1 | mRNA | upstream | 45391 | 22137694 ~ 22146705 (-) | False | pole2 |
| XM_026919112.2 | mRNA | upstream | 80963 | 22173266 ~ 22183862 (-) | True | lrr1 |
| XM_026919089.2 | mRNA | upstream | 105250 | 22197553 ~ 22241003 (-) | True | LOC113529708 |
| XM_026919090.2 | mRNA | upstream | 105250 | 22197553 ~ 22240860 (-) | False | LOC113529708 |
| TU200304 | other | downstream | 1274744 | 20814561 ~ 20817216 (-) | False | grem1b |
| XR_003403127.1 | other | downstream | 1358908 | 20732930 ~ 20733052 (-) | True | LOC113530231 |
| TU200198 | other | downstream | 1526161 | 20564929 ~ 20565799 (-) | True | G169119 |
| TU199915 | other | downstream | 1761216 | 20322764 ~ 20330744 (-) | True | gchfr |
| TU199706 | other | downstream | 2073266 | 20013579 ~ 20018694 (-) | True | srp14 |
| TU201211 | other | upstream | 23262 | 22115565 ~ 22115876 (-) | True | G170023 |
| TU201673 | other | upstream | 763191 | 22855494 ~ 22863767 (-) | True | G170435 |
| TU202681 | other | upstream | 2708780 | 24801083 ~ 24807095 (-) | False | G171256 |
| TU203072 | other | upstream | 3166536 | 25258839 ~ 25259209 (-) | False | G171569 |
| TU203074 | other | upstream | 3166536 | 25258839 ~ 25259362 (-) | True | G171569 |
