Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU201277 |
| length | 212 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G170083 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 22385939 ~ 22386150 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0048729 | tissue morphogenesis | biological_process |
| GO:0021532 | neural tube patterning | biological_process |
| GO:0007498 | mesoderm development | biological_process |
| GO:0009888 | tissue development | biological_process |
| GO:0009653 | anatomical structure morphogenesis | biological_process |
| GO:0021903 | rostrocaudal neural tube patterning | biological_process |
| GO:0048598 | embryonic morphogenesis | biological_process |
| GO:0048332 | mesoderm morphogenesis | biological_process |
| GO:0007389 | pattern specification process | biological_process |
| GO:0030917 | midbrain-hindbrain boundary development | biological_process |
| GO:0009790 | embryo development | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578968.1 | lncRNA | upstream | 14739 | 22349056 ~ 22371200 (+) | True | LOC117598285 |
| TU201270 | lncRNA | upstream | 37779 | 22314691 ~ 22348160 (+) | True | G170078 |
| TU201266 | lncRNA | upstream | 72574 | 22309505 ~ 22313365 (+) | True | G170075 |
| TU201267 | lncRNA | upstream | 89885 | 22286857 ~ 22296054 (+) | True | G170076 |
| XR_004578964.1 | lncRNA | upstream | 106111 | 22276112 ~ 22279828 (+) | True | LOC117598281 |
| XR_004579042.1 | lncRNA | downstream | 25012 | 22411162 ~ 22411362 (+) | True | LOC113530233 |
| XR_004578969.1 | lncRNA | downstream | 30026 | 22416176 ~ 22416851 (+) | True | LOC117598286 |
| TU201469 | lncRNA | downstream | 371090 | 22757240 ~ 22757444 (+) | True | G170260 |
| TU201470 | lncRNA | downstream | 373091 | 22759241 ~ 22759476 (+) | True | G170261 |
| TU201475 | lncRNA | downstream | 379573 | 22765723 ~ 22767755 (+) | True | G170266 |
| XM_026919102.2 | mRNA | upstream | 131671 | 22241018 ~ 22254268 (+) | True | LOC113529714 |
| XM_034307809.1 | mRNA | downstream | 475657 | 22861807 ~ 23022395 (+) | False | LOC113533992 |
| XM_034307804.1 | mRNA | downstream | 475657 | 22861807 ~ 22982148 (+) | False | LOC113533992 |
| XM_034307806.1 | mRNA | downstream | 475657 | 22861807 ~ 22982148 (+) | False | LOC113533992 |
| XM_034307808.1 | mRNA | downstream | 475657 | 22861807 ~ 22982148 (+) | False | LOC113533992 |
| XM_034307810.1 | mRNA | downstream | 475658 | 22861808 ~ 23022395 (+) | False | LOC113533992 |
| TU200872 | other | upstream | 565880 | 21819281 ~ 21820059 (+) | True | G169692 |
| TU200725 | other | upstream | 711478 | 21669907 ~ 21674461 (+) | True | G169577 |
| XR_004578912.1 | other | upstream | 1854717 | 20528519 ~ 20531222 (+) | False | LOC113530103 |
| XR_004578924.1 | other | downstream | 475657 | 22861807 ~ 23022395 (+) | False | LOC113533992 |
| XR_004578925.1 | other | downstream | 475660 | 22861810 ~ 23022395 (+) | False | LOC113533992 |
| TU201530 | other | downstream | 475877 | 22862027 ~ 22890770 (+) | True | LOC113533992 |
| trnah-gug_10 | other | downstream | 1575834 | 23961984 ~ 23962055 (+) | True | trnah-gug_10 |
| trnah-gug_11 | other | downstream | 1578698 | 23964848 ~ 23964919 (+) | True | trnah-gug_11 |
