Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU202188 |
| length | 232 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G170852 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 23894124 ~ 23894355 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| ko05217 | Basal cell carcinoma |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU202111 | lncRNA | downstream | 114890 | 23777979 ~ 23779234 (-) | True | G170788 |
| TU202110 | lncRNA | downstream | 114890 | 23778269 ~ 23779234 (-) | False | G170788 |
| TU202129 | lncRNA | downstream | 116813 | 23776555 ~ 23777311 (-) | True | G170805 |
| TU202098 | lncRNA | downstream | 149692 | 23720111 ~ 23744432 (-) | True | G170779 |
| TU202118 | lncRNA | downstream | 175355 | 23718545 ~ 23718769 (-) | True | G170795 |
| TU202202 | lncRNA | upstream | 24070 | 23918425 ~ 23919023 (-) | True | G170866 |
| TU202233 | lncRNA | upstream | 101211 | 23995566 ~ 23998711 (-) | True | G170887 |
| TU202284 | lncRNA | upstream | 140153 | 24034508 ~ 24034898 (-) | True | G170936 |
| TU202385 | lncRNA | upstream | 353330 | 24247685 ~ 24248015 (-) | True | G171028 |
| TU202417 | lncRNA | upstream | 389654 | 24284009 ~ 24284401 (-) | True | G171056 |
| XM_026926862.2 | mRNA | downstream | 1485 | 23884755 ~ 23892639 (-) | True | wars1 |
| XM_026926587.2 | mRNA | downstream | 17167 | 23869091 ~ 23876957 (-) | False | LOC113534026 |
| XM_034308281.1 | mRNA | downstream | 17167 | 23869091 ~ 23876957 (-) | False | LOC113534026 |
| XM_026926586.2 | mRNA | downstream | 17167 | 23869091 ~ 23876957 (-) | True | LOC113534026 |
| XM_034308282.1 | mRNA | downstream | 17470 | 23869091 ~ 23876654 (-) | False | LOC113534026 |
| XM_026925971.2 | mRNA | upstream | 24783 | 23919138 ~ 23951036 (-) | False | LOC113533700 |
| XM_026925973.2 | mRNA | upstream | 24783 | 23919138 ~ 23950979 (-) | False | LOC113533700 |
| XM_026925970.2 | mRNA | upstream | 24783 | 23919138 ~ 23950979 (-) | True | LOC113533700 |
| XM_026926229.2 | mRNA | upstream | 109110 | 24003465 ~ 24028482 (-) | True | smyd2a |
| XM_034308235.1 | mRNA | upstream | 146390 | 24040745 ~ 24078739 (-) | False | prox1a |
| TU201673 | other | downstream | 1030357 | 22855494 ~ 22863767 (-) | True | G170435 |
| TU201211 | other | downstream | 1778248 | 22115565 ~ 22115876 (-) | True | G170023 |
| TU200304 | other | downstream | 3076908 | 20814561 ~ 20817216 (-) | False | grem1b |
| XR_003403127.1 | other | downstream | 3161072 | 20732930 ~ 20733052 (-) | True | LOC113530231 |
| TU200198 | other | downstream | 3328325 | 20564929 ~ 20565799 (-) | True | G169119 |
| TU202681 | other | upstream | 906728 | 24801083 ~ 24807095 (-) | False | G171256 |
| TU203072 | other | upstream | 1364484 | 25258839 ~ 25259209 (-) | False | G171569 |
| TU203074 | other | upstream | 1364484 | 25258839 ~ 25259362 (-) | True | G171569 |
| TU203284 | other | upstream | 1684584 | 25578939 ~ 25582527 (-) | True | G171734 |
| TU204658 | other | upstream | 4005136 | 27899491 ~ 27910890 (-) | True | si:ch73-204p21.2 |
