Item | Value |
---|---|
RNA id | TU202284 |
length | 391 |
lncRNA type | inter_gene |
GC content | 0.38 |
exon number | 1 |
gene id | G170936 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047604.1 |
NCBI id | CM018550.1 |
chromosome length | 29376037 |
location | 24034508 ~ 24034898 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU202233 | lncRNA | downstream | 35797 | 23995566 ~ 23998711 (-) | True | G170887 |
TU202202 | lncRNA | downstream | 115485 | 23918425 ~ 23919023 (-) | True | G170866 |
TU202188 | lncRNA | downstream | 140153 | 23894124 ~ 23894355 (-) | True | G170852 |
TU202111 | lncRNA | downstream | 255274 | 23777979 ~ 23779234 (-) | True | G170788 |
TU202110 | lncRNA | downstream | 255274 | 23778269 ~ 23779234 (-) | False | G170788 |
TU202385 | lncRNA | upstream | 212787 | 24247685 ~ 24248015 (-) | True | G171028 |
TU202417 | lncRNA | upstream | 249111 | 24284009 ~ 24284401 (-) | True | G171056 |
TU202554 | lncRNA | upstream | 384033 | 24418931 ~ 24494790 (-) | True | G171160 |
TU202581 | lncRNA | upstream | 433325 | 24468223 ~ 24469486 (-) | True | G171175 |
TU202589 | lncRNA | upstream | 480011 | 24514909 ~ 24543974 (-) | False | luzp1 |
XM_026926229.2 | mRNA | downstream | 6026 | 24003465 ~ 24028482 (-) | True | smyd2a |
XM_026925971.2 | mRNA | downstream | 83472 | 23919138 ~ 23951036 (-) | False | LOC113533700 |
XM_026925973.2 | mRNA | downstream | 83529 | 23919138 ~ 23950979 (-) | False | LOC113533700 |
XM_026925970.2 | mRNA | downstream | 83529 | 23919138 ~ 23950979 (-) | True | LOC113533700 |
XM_026926862.2 | mRNA | downstream | 141869 | 23884755 ~ 23892639 (-) | True | wars1 |
XM_034308235.1 | mRNA | upstream | 5847 | 24040745 ~ 24078739 (-) | False | prox1a |
XM_034308234.1 | mRNA | upstream | 5847 | 24040745 ~ 24078739 (-) | False | prox1a |
XM_034308233.1 | mRNA | upstream | 8719 | 24043617 ~ 24078739 (-) | True | prox1a |
XM_034308286.1 | mRNA | upstream | 251944 | 24286842 ~ 24291965 (-) | True | LOC117598332 |
XM_026926835.2 | mRNA | upstream | 272101 | 24306999 ~ 24320497 (-) | True | LOC113534192 |
TU201673 | other | downstream | 1170741 | 22855494 ~ 22863767 (-) | True | G170435 |
TU201211 | other | downstream | 1918632 | 22115565 ~ 22115876 (-) | True | G170023 |
TU200304 | other | downstream | 3217292 | 20814561 ~ 20817216 (-) | False | grem1b |
XR_003403127.1 | other | downstream | 3301456 | 20732930 ~ 20733052 (-) | True | LOC113530231 |
TU200198 | other | downstream | 3468709 | 20564929 ~ 20565799 (-) | True | G169119 |
TU202681 | other | upstream | 766185 | 24801083 ~ 24807095 (-) | False | G171256 |
TU203072 | other | upstream | 1223941 | 25258839 ~ 25259209 (-) | False | G171569 |
TU203074 | other | upstream | 1223941 | 25258839 ~ 25259362 (-) | True | G171569 |
TU203284 | other | upstream | 1544041 | 25578939 ~ 25582527 (-) | True | G171734 |
TU204658 | other | upstream | 3864593 | 27899491 ~ 27910890 (-) | True | si:ch73-204p21.2 |