Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU202385 |
| length | 331 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 1 |
| gene id | G171028 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 24247685 ~ 24248015 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU202284 | lncRNA | downstream | 212787 | 24034508 ~ 24034898 (-) | True | G170936 |
| TU202233 | lncRNA | downstream | 248974 | 23995566 ~ 23998711 (-) | True | G170887 |
| TU202202 | lncRNA | downstream | 328662 | 23918425 ~ 23919023 (-) | True | G170866 |
| TU202188 | lncRNA | downstream | 353330 | 23894124 ~ 23894355 (-) | True | G170852 |
| TU202111 | lncRNA | downstream | 468451 | 23777979 ~ 23779234 (-) | True | G170788 |
| TU202417 | lncRNA | upstream | 35994 | 24284009 ~ 24284401 (-) | True | G171056 |
| TU202554 | lncRNA | upstream | 170916 | 24418931 ~ 24494790 (-) | True | G171160 |
| TU202581 | lncRNA | upstream | 220208 | 24468223 ~ 24469486 (-) | True | G171175 |
| TU202589 | lncRNA | upstream | 266894 | 24514909 ~ 24543974 (-) | False | luzp1 |
| TU202594 | lncRNA | upstream | 280312 | 24528327 ~ 24528696 (-) | True | G171184 |
| XM_034308235.1 | mRNA | downstream | 168946 | 24040745 ~ 24078739 (-) | False | prox1a |
| XM_034308234.1 | mRNA | downstream | 168946 | 24040745 ~ 24078739 (-) | False | prox1a |
| XM_034308233.1 | mRNA | downstream | 168946 | 24043617 ~ 24078739 (-) | True | prox1a |
| XM_026926229.2 | mRNA | downstream | 219203 | 24003465 ~ 24028482 (-) | True | smyd2a |
| XM_026925971.2 | mRNA | downstream | 296649 | 23919138 ~ 23951036 (-) | False | LOC113533700 |
| XM_034308286.1 | mRNA | upstream | 38827 | 24286842 ~ 24291965 (-) | True | LOC117598332 |
| XM_026926835.2 | mRNA | upstream | 58984 | 24306999 ~ 24320497 (-) | True | LOC113534192 |
| XM_026926567.2 | mRNA | upstream | 78928 | 24326943 ~ 24331095 (-) | True | ccdc28a |
| XM_026926645.2 | mRNA | upstream | 115987 | 24364002 ~ 24380106 (-) | True | tmem121aa |
| XM_034307756.1 | mRNA | upstream | 143038 | 24391053 ~ 24401559 (-) | False | tedc1 |
| TU201673 | other | downstream | 1383918 | 22855494 ~ 22863767 (-) | True | G170435 |
| TU201211 | other | downstream | 2131809 | 22115565 ~ 22115876 (-) | True | G170023 |
| TU200304 | other | downstream | 3430469 | 20814561 ~ 20817216 (-) | False | grem1b |
| XR_003403127.1 | other | downstream | 3514633 | 20732930 ~ 20733052 (-) | True | LOC113530231 |
| TU200198 | other | downstream | 3681886 | 20564929 ~ 20565799 (-) | True | G169119 |
| TU202681 | other | upstream | 553068 | 24801083 ~ 24807095 (-) | False | G171256 |
| TU203072 | other | upstream | 1010824 | 25258839 ~ 25259209 (-) | False | G171569 |
| TU203074 | other | upstream | 1010824 | 25258839 ~ 25259362 (-) | True | G171569 |
| TU203284 | other | upstream | 1330924 | 25578939 ~ 25582527 (-) | True | G171734 |
| TU204658 | other | upstream | 3651476 | 27899491 ~ 27910890 (-) | True | si:ch73-204p21.2 |
