Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU202594 |
| length | 344 |
| lncRNA type | intronic |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G171184 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 24528327 ~ 24528696 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU202554 | lncRNA | downstream | 33537 | 24418931 ~ 24494790 (-) | True | G171160 |
| TU202581 | lncRNA | downstream | 58841 | 24468223 ~ 24469486 (-) | True | G171175 |
| TU202417 | lncRNA | downstream | 243926 | 24284009 ~ 24284401 (-) | True | G171056 |
| TU202385 | lncRNA | downstream | 280312 | 24247685 ~ 24248015 (-) | True | G171028 |
| TU202284 | lncRNA | downstream | 493429 | 24034508 ~ 24034898 (-) | True | G170936 |
| TU202651 | lncRNA | upstream | 69579 | 24598275 ~ 24655253 (-) | True | G171232 |
| TU202688 | lncRNA | upstream | 238214 | 24766910 ~ 24801063 (-) | True | G171258 |
| TU202677 | lncRNA | upstream | 252586 | 24781282 ~ 24868017 (-) | True | G171256 |
| TU202683 | lncRNA | upstream | 254321 | 24783017 ~ 24915150 (-) | False | G171257 |
| TU202684 | lncRNA | upstream | 254321 | 24783017 ~ 24890401 (-) | False | G171257 |
| XM_026926874.2 | mRNA | downstream | 65391 | 24454401 ~ 24462936 (-) | True | tmem30b |
| XM_026926889.2 | mRNA | downstream | 78365 | 24443797 ~ 24449962 (-) | True | smndc1 |
| XM_026926039.2 | mRNA | downstream | 88073 | 24431395 ~ 24440254 (-) | True | samd8 |
| XM_034307735.1 | mRNA | downstream | 90248 | 24431395 ~ 24438079 (-) | False | samd8 |
| XM_026926577.2 | mRNA | downstream | 119545 | 24403823 ~ 24408782 (-) | True | dnal1 |
| XM_026926062.2 | mRNA | upstream | 445343 | 24974039 ~ 24991828 (-) | True | cep295 |
| XM_026926064.2 | mRNA | upstream | 445343 | 24974039 ~ 24991827 (-) | False | cep295 |
| XM_026926447.2 | mRNA | upstream | 481087 | 25009783 ~ 25046786 (-) | True | si:ch211-266o15.1 |
| XM_034307977.1 | mRNA | upstream | 527668 | 25056364 ~ 25106759 (-) | False | nid2a |
| XM_034307978.1 | mRNA | upstream | 527668 | 25056364 ~ 25106759 (-) | False | nid2a |
| TU201673 | other | downstream | 1664560 | 22855494 ~ 22863767 (-) | True | G170435 |
| TU201211 | other | downstream | 2412451 | 22115565 ~ 22115876 (-) | True | G170023 |
| TU200304 | other | downstream | 3711111 | 20814561 ~ 20817216 (-) | False | grem1b |
| XR_003403127.1 | other | downstream | 3795275 | 20732930 ~ 20733052 (-) | True | LOC113530231 |
| TU200198 | other | downstream | 3962528 | 20564929 ~ 20565799 (-) | True | G169119 |
| TU202681 | other | upstream | 272387 | 24801083 ~ 24807095 (-) | False | G171256 |
| TU203072 | other | upstream | 730143 | 25258839 ~ 25259209 (-) | False | G171569 |
| TU203074 | other | upstream | 730143 | 25258839 ~ 25259362 (-) | True | G171569 |
| TU203284 | other | upstream | 1050243 | 25578939 ~ 25582527 (-) | True | G171734 |
| TU204658 | other | upstream | 3370795 | 27899491 ~ 27910890 (-) | True | si:ch73-204p21.2 |
