Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU202651 |
| length | 372 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G171232 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 24598275 ~ 24655253 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU202589 | lncRNA | downstream | 54301 | 24514909 ~ 24543974 (-) | False | luzp1 |
| TU202594 | lncRNA | downstream | 69579 | 24528327 ~ 24528696 (-) | True | G171184 |
| TU202554 | lncRNA | downstream | 103485 | 24418931 ~ 24494790 (-) | True | G171160 |
| TU202581 | lncRNA | downstream | 128789 | 24468223 ~ 24469486 (-) | True | G171175 |
| TU202417 | lncRNA | downstream | 313874 | 24284009 ~ 24284401 (-) | True | G171056 |
| TU202688 | lncRNA | upstream | 111657 | 24766910 ~ 24801063 (-) | True | G171258 |
| TU202677 | lncRNA | upstream | 126029 | 24781282 ~ 24868017 (-) | True | G171256 |
| TU202683 | lncRNA | upstream | 127764 | 24783017 ~ 24915150 (-) | False | G171257 |
| TU202684 | lncRNA | upstream | 127764 | 24783017 ~ 24890401 (-) | False | G171257 |
| TU202676 | lncRNA | upstream | 140293 | 24795546 ~ 24868017 (-) | False | G171256 |
| XM_034308381.1 | mRNA | downstream | 54196 | 24490238 ~ 24544079 (-) | False | luzp1 |
| XM_034308380.1 | mRNA | downstream | 54196 | 24490238 ~ 24544079 (-) | False | luzp1 |
| XM_034308379.1 | mRNA | downstream | 54196 | 24490238 ~ 24544079 (-) | True | luzp1 |
| XM_034308382.1 | mRNA | downstream | 60440 | 24490238 ~ 24537835 (-) | False | luzp1 |
| XM_026926874.2 | mRNA | downstream | 135339 | 24454401 ~ 24462936 (-) | True | tmem30b |
| XM_026926062.2 | mRNA | upstream | 318786 | 24974039 ~ 24991828 (-) | True | cep295 |
| XM_026926064.2 | mRNA | upstream | 318786 | 24974039 ~ 24991827 (-) | False | cep295 |
| XM_026926447.2 | mRNA | upstream | 354530 | 25009783 ~ 25046786 (-) | True | si:ch211-266o15.1 |
| XM_034307977.1 | mRNA | upstream | 401111 | 25056364 ~ 25106759 (-) | False | nid2a |
| XM_034307978.1 | mRNA | upstream | 401111 | 25056364 ~ 25106759 (-) | False | nid2a |
| TU201673 | other | downstream | 1734508 | 22855494 ~ 22863767 (-) | True | G170435 |
| TU201211 | other | downstream | 2482399 | 22115565 ~ 22115876 (-) | True | G170023 |
| TU200304 | other | downstream | 3781059 | 20814561 ~ 20817216 (-) | False | grem1b |
| XR_003403127.1 | other | downstream | 3865223 | 20732930 ~ 20733052 (-) | True | LOC113530231 |
| TU200198 | other | downstream | 4032476 | 20564929 ~ 20565799 (-) | True | G169119 |
| TU202681 | other | upstream | 145830 | 24801083 ~ 24807095 (-) | False | G171256 |
| TU203072 | other | upstream | 603586 | 25258839 ~ 25259209 (-) | False | G171569 |
| TU203074 | other | upstream | 603586 | 25258839 ~ 25259362 (-) | True | G171569 |
| TU203284 | other | upstream | 923686 | 25578939 ~ 25582527 (-) | True | G171734 |
| TU204658 | other | upstream | 3244238 | 27899491 ~ 27910890 (-) | True | si:ch73-204p21.2 |
