Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026926768.2 |
| length | 1075 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 2 |
| gene id | LOC113534148 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 25426891 ~ 25430929 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU203020 | lncRNA | upstream | 37503 | 25389366 ~ 25389505 (+) | True | G171523 |
| TU203019 | lncRNA | upstream | 37842 | 25388772 ~ 25389166 (+) | True | G171522 |
| TU202980 | lncRNA | upstream | 147331 | 25271849 ~ 25279677 (+) | True | G171485 |
| TU202934 | lncRNA | upstream | 187944 | 25189165 ~ 25239064 (+) | True | G171440 |
| TU202920 | lncRNA | upstream | 250775 | 25175826 ~ 25176233 (+) | True | G171430 |
| TU203132 | lncRNA | downstream | 87187 | 25518116 ~ 25522689 (+) | True | G171619 |
| TU203168 | lncRNA | downstream | 156560 | 25587489 ~ 25592749 (+) | True | G171647 |
| TU203215 | lncRNA | downstream | 251465 | 25682394 ~ 25778732 (+) | True | G171684 |
| XR_004579001.1 | lncRNA | downstream | 1195011 | 26625940 ~ 26686726 (+) | True | LOC117598331 |
| TU203645 | lncRNA | downstream | 1358594 | 26789523 ~ 26789807 (+) | True | G172052 |
| XM_026926079.2 | mRNA | upstream | 38348 | 25381712 ~ 25388660 (+) | True | gnpnat1 |
| XM_026926285.2 | mRNA | upstream | 108731 | 25258811 ~ 25318277 (+) | True | samd4a |
| XM_026926287.2 | mRNA | upstream | 108731 | 25258811 ~ 25318277 (+) | False | samd4a |
| XM_026926286.2 | mRNA | upstream | 108731 | 25258811 ~ 25318277 (+) | False | samd4a |
| XM_026926876.2 | mRNA | upstream | 188417 | 25206837 ~ 25238591 (+) | True | gpr137c |
| XM_026926856.2 | mRNA | downstream | 38529 | 25469458 ~ 25489162 (+) | True | si:ch211-266g18.6 |
| XM_026926904.2 | mRNA | downstream | 59346 | 25490275 ~ 25494255 (+) | True | cx40.8 |
| XM_026925940.2 | mRNA | downstream | 73553 | 25504482 ~ 25506510 (+) | True | fabp7a |
| XM_034307768.1 | mRNA | downstream | 147964 | 25578893 ~ 25582638 (+) | True | marcksb |
| XM_026926060.2 | mRNA | downstream | 147964 | 25578893 ~ 25581753 (+) | False | marcksb |
| TU202966 | other | upstream | 108747 | 25315560 ~ 25318261 (+) | False | samd4a |
| TU202922 | other | upstream | 250176 | 25176376 ~ 25176832 (+) | False | LOC117598238 |
| TU202767 | other | upstream | 419242 | 25003983 ~ 25007766 (+) | True | G171329 |
| TU202761 | other | upstream | 426959 | 24994493 ~ 25000049 (+) | False | cx28.6 |
| trnar-acg_3 | other | upstream | 997346 | 24429590 ~ 24429662 (+) | True | trnar-acg_3 |
| trnat-ugu_12 | other | downstream | 1484429 | 26915358 ~ 26915430 (+) | True | trnat-ugu_12 |
| XR_003403449.2 | other | downstream | 1725414 | 27156343 ~ 27465649 (+) | False | nrxn3a |
| XR_003403450.2 | other | downstream | 1725414 | 27156343 ~ 27465649 (+) | False | nrxn3a |
| XR_003403451.2 | other | downstream | 1725414 | 27156343 ~ 27465649 (+) | False | nrxn3a |
| trnak-uuu_7 | other | downstream | 2294278 | 27725207 ~ 27725279 (+) | True | trnak-uuu_7 |
