Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU203440 |
| length | 265 |
| lncRNA type | inter_gene |
| GC content | 0.56 |
| exon number | 1 |
| gene id | G171874 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 26058245 ~ 26058509 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU203430 | lncRNA | downstream | 80218 | 25977796 ~ 25978027 (-) | True | G171864 |
| TU203311 | lncRNA | downstream | 279279 | 25773504 ~ 25778966 (-) | True | G171755 |
| TU203274 | lncRNA | downstream | 548625 | 25504388 ~ 25509620 (-) | True | G171726 |
| TU203256 | lncRNA | downstream | 588171 | 25469504 ~ 25470074 (-) | True | G171710 |
| TU203103 | lncRNA | downstream | 668374 | 25389583 ~ 25389871 (-) | True | G171594 |
| TU203600 | lncRNA | upstream | 536772 | 26595281 ~ 26595483 (-) | True | G172016 |
| TU203802 | lncRNA | upstream | 713623 | 26772132 ~ 26773050 (-) | True | G172196 |
| TU203813 | lncRNA | upstream | 770809 | 26829318 ~ 26829729 (-) | True | G172207 |
| TU203819 | lncRNA | upstream | 811838 | 26870347 ~ 26870619 (-) | True | G172211 |
| TU203821 | lncRNA | upstream | 836259 | 26894768 ~ 26959616 (-) | True | G172212 |
| XM_026926682.2 | mRNA | downstream | 377504 | 25679314 ~ 25680741 (-) | True | cx52.7 |
| XM_034308356.1 | mRNA | downstream | 388270 | 25664338 ~ 25669975 (-) | True | manea |
| XM_026926505.2 | mRNA | downstream | 397590 | 25651808 ~ 25660655 (-) | True | fut9a |
| XM_026926059.2 | mRNA | downstream | 418024 | 25634727 ~ 25640221 (-) | True | fhl5 |
| XM_026926867.2 | mRNA | downstream | 424362 | 25620016 ~ 25633883 (-) | True | si:ch211-266g18.9 |
| XM_034308237.1 | mRNA | upstream | 254300 | 26312809 ~ 26321625 (-) | True | LOC113534079 |
| XM_034308046.1 | mRNA | upstream | 304557 | 26363066 ~ 26403989 (-) | True | si:dkey-288a3.2 |
| XM_026926840.2 | mRNA | upstream | 682865 | 26741374 ~ 26794919 (-) | False | bcl11ba |
| XM_026926839.2 | mRNA | upstream | 682865 | 26741374 ~ 26794919 (-) | True | bcl11ba |
| XM_034308270.1 | mRNA | upstream | 760391 | 26818900 ~ 26845135 (-) | False | setd3 |
| TU203284 | other | downstream | 475718 | 25578939 ~ 25582527 (-) | True | G171734 |
| TU203074 | other | downstream | 798883 | 25258839 ~ 25259362 (-) | True | G171569 |
| TU203072 | other | downstream | 799036 | 25258839 ~ 25259209 (-) | False | G171569 |
| TU202681 | other | downstream | 1251150 | 24801083 ~ 24807095 (-) | False | G171256 |
| TU201673 | other | downstream | 3194478 | 22855494 ~ 22863767 (-) | True | G170435 |
| TU204658 | other | upstream | 1840982 | 27899491 ~ 27910890 (-) | True | si:ch73-204p21.2 |
| TU204659 | other | upstream | 1840982 | 27899491 ~ 27910890 (-) | False | si:ch73-204p21.2 |
| TU204662 | other | upstream | 1853728 | 27912237 ~ 27912544 (-) | True | G172919 |
| TU205159 | other | upstream | 2778383 | 28836892 ~ 29050026 (-) | True | G173287 |
| XR_004578919.1 | other | upstream | 2842395 | 28900904 ~ 28908552 (-) | False | stmn4l |
