Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU203802 |
| length | 881 |
| lncRNA type | intronic |
| GC content | 0.34 |
| exon number | 2 |
| gene id | G172196 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 26772132 ~ 26773050 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU203600 | lncRNA | downstream | 176649 | 26595281 ~ 26595483 (-) | True | G172016 |
| TU203440 | lncRNA | downstream | 713623 | 26058245 ~ 26058509 (-) | True | G171874 |
| TU203430 | lncRNA | downstream | 794105 | 25977796 ~ 25978027 (-) | True | G171864 |
| TU203311 | lncRNA | downstream | 993166 | 25773504 ~ 25778966 (-) | True | G171755 |
| TU203274 | lncRNA | downstream | 1262512 | 25504388 ~ 25509620 (-) | True | G171726 |
| TU203813 | lncRNA | upstream | 56268 | 26829318 ~ 26829729 (-) | True | G172207 |
| TU203819 | lncRNA | upstream | 97297 | 26870347 ~ 26870619 (-) | True | G172211 |
| TU203821 | lncRNA | upstream | 121718 | 26894768 ~ 26959616 (-) | True | G172212 |
| XR_004578992.1 | lncRNA | upstream | 143768 | 26916818 ~ 26920537 (-) | False | LOC113534208 |
| XR_003403481.2 | lncRNA | upstream | 144036 | 26917086 ~ 26920537 (-) | True | LOC113534208 |
| XM_034308046.1 | mRNA | downstream | 368143 | 26363066 ~ 26403989 (-) | True | si:dkey-288a3.2 |
| XM_034308237.1 | mRNA | downstream | 450507 | 26312809 ~ 26321625 (-) | True | LOC113534079 |
| XM_026926682.2 | mRNA | downstream | 1091391 | 25679314 ~ 25680741 (-) | True | cx52.7 |
| XM_034308356.1 | mRNA | downstream | 1102157 | 25664338 ~ 25669975 (-) | True | manea |
| XM_026926505.2 | mRNA | downstream | 1111477 | 25651808 ~ 25660655 (-) | True | fut9a |
| XM_034308270.1 | mRNA | upstream | 45850 | 26818900 ~ 26845135 (-) | False | setd3 |
| XM_034308271.1 | mRNA | upstream | 45850 | 26818900 ~ 26844995 (-) | True | setd3 |
| XM_026926508.2 | mRNA | upstream | 73796 | 26846846 ~ 26898308 (-) | True | ccdc85ca |
| XM_026926758.2 | mRNA | upstream | 156611 | 26929661 ~ 26955838 (-) | True | ism2a |
| XM_034308244.1 | mRNA | upstream | 186773 | 26959823 ~ 26989620 (-) | True | sptlc2a |
| TU203284 | other | downstream | 1189605 | 25578939 ~ 25582527 (-) | True | G171734 |
| TU203074 | other | downstream | 1512770 | 25258839 ~ 25259362 (-) | True | G171569 |
| TU203072 | other | downstream | 1512923 | 25258839 ~ 25259209 (-) | False | G171569 |
| TU202681 | other | downstream | 1965037 | 24801083 ~ 24807095 (-) | False | G171256 |
| TU201673 | other | downstream | 3908365 | 22855494 ~ 22863767 (-) | True | G170435 |
| TU204658 | other | upstream | 1126441 | 27899491 ~ 27910890 (-) | True | si:ch73-204p21.2 |
| TU204659 | other | upstream | 1126441 | 27899491 ~ 27910890 (-) | False | si:ch73-204p21.2 |
| TU204662 | other | upstream | 1139187 | 27912237 ~ 27912544 (-) | True | G172919 |
| TU205159 | other | upstream | 2063842 | 28836892 ~ 29050026 (-) | True | G173287 |
| XR_004578919.1 | other | upstream | 2127854 | 28900904 ~ 28908552 (-) | False | stmn4l |
