Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU203838 |
| length | 465 |
| lncRNA type | read_through |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G172225 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 26978466 ~ 27052034 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU203821 | lncRNA | downstream | 18850 | 26894768 ~ 26959616 (-) | True | G172212 |
| XR_004578992.1 | lncRNA | downstream | 57929 | 26916818 ~ 26920537 (-) | False | LOC113534208 |
| XR_003403481.2 | lncRNA | downstream | 57929 | 26917086 ~ 26920537 (-) | True | LOC113534208 |
| TU203819 | lncRNA | downstream | 107847 | 26870347 ~ 26870619 (-) | True | G172211 |
| TU203813 | lncRNA | downstream | 148737 | 26829318 ~ 26829729 (-) | True | G172207 |
| TU204297 | lncRNA | upstream | 413838 | 27465872 ~ 27491804 (-) | True | G172635 |
| TU204334 | lncRNA | upstream | 513271 | 27565305 ~ 27566560 (-) | False | foxn3 |
| TU204374 | lncRNA | upstream | 672527 | 27724561 ~ 27725757 (-) | False | efcab11 |
| XR_004578961.1 | lncRNA | upstream | 712571 | 27764605 ~ 27768101 (-) | True | LOC117598276 |
| TU204484 | lncRNA | upstream | 735288 | 27787322 ~ 27787728 (-) | True | G172782 |
| XM_026926758.2 | mRNA | downstream | 22628 | 26929661 ~ 26955838 (-) | True | ism2a |
| XM_026926508.2 | mRNA | downstream | 80158 | 26846846 ~ 26898308 (-) | True | ccdc85ca |
| XM_034308270.1 | mRNA | downstream | 133331 | 26818900 ~ 26845135 (-) | False | setd3 |
| XM_034308271.1 | mRNA | downstream | 133471 | 26818900 ~ 26844995 (-) | True | setd3 |
| XM_026926840.2 | mRNA | downstream | 183547 | 26741374 ~ 26794919 (-) | False | bcl11ba |
| XM_026925974.2 | mRNA | upstream | 430847 | 27482881 ~ 27489113 (-) | True | dio2 |
| XM_026926481.2 | mRNA | upstream | 476829 | 27528863 ~ 27557994 (-) | False | ston2 |
| XM_026926482.2 | mRNA | upstream | 476829 | 27528863 ~ 27557005 (-) | False | ston2 |
| XM_026926479.2 | mRNA | upstream | 476829 | 27528863 ~ 27553284 (-) | False | ston2 |
| XM_026926480.2 | mRNA | upstream | 476829 | 27528863 ~ 27553284 (-) | True | ston2 |
| TU203284 | other | downstream | 1395939 | 25578939 ~ 25582527 (-) | True | G171734 |
| TU203074 | other | downstream | 1719104 | 25258839 ~ 25259362 (-) | True | G171569 |
| TU203072 | other | downstream | 1719257 | 25258839 ~ 25259209 (-) | False | G171569 |
| TU202681 | other | downstream | 2171371 | 24801083 ~ 24807095 (-) | False | G171256 |
| TU201673 | other | downstream | 4114699 | 22855494 ~ 22863767 (-) | True | G170435 |
| TU204658 | other | upstream | 847457 | 27899491 ~ 27910890 (-) | True | si:ch73-204p21.2 |
| TU204659 | other | upstream | 847457 | 27899491 ~ 27910890 (-) | False | si:ch73-204p21.2 |
| TU204662 | other | upstream | 860203 | 27912237 ~ 27912544 (-) | True | G172919 |
| TU205159 | other | upstream | 1784858 | 28836892 ~ 29050026 (-) | True | G173287 |
| XR_004578919.1 | other | upstream | 1848870 | 28900904 ~ 28908552 (-) | False | stmn4l |
