Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU204484 |
| length | 313 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G172782 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 27787322 ~ 27787728 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578961.1 | lncRNA | downstream | 19221 | 27764605 ~ 27768101 (-) | True | LOC117598276 |
| TU204374 | lncRNA | downstream | 61565 | 27724561 ~ 27725757 (-) | False | efcab11 |
| TU204334 | lncRNA | downstream | 220762 | 27565305 ~ 27566560 (-) | False | foxn3 |
| TU204297 | lncRNA | downstream | 295518 | 27465872 ~ 27491804 (-) | True | G172635 |
| TU203838 | lncRNA | downstream | 735288 | 26978466 ~ 27052034 (-) | True | G172225 |
| TU204486 | lncRNA | upstream | 45804 | 27833532 ~ 27834840 (-) | True | G172784 |
| TU204668 | lncRNA | upstream | 146253 | 27933981 ~ 27936828 (-) | True | G172925 |
| TU204645 | lncRNA | upstream | 173241 | 27960969 ~ 28044248 (-) | True | G172903 |
| TU204715 | lncRNA | upstream | 231500 | 28019228 ~ 28063603 (-) | True | G172965 |
| TU204760 | lncRNA | upstream | 342445 | 28130173 ~ 28135542 (-) | True | G172996 |
| XM_026926210.2 | mRNA | downstream | 61593 | 27671623 ~ 27725729 (-) | False | efcab11 |
| XM_026926209.2 | mRNA | downstream | 61593 | 27671623 ~ 27725729 (-) | True | efcab11 |
| XM_026926309.2 | mRNA | downstream | 135021 | 27565258 ~ 27652301 (-) | True | foxn3 |
| XM_034308293.1 | mRNA | upstream | 6692 | 27794420 ~ 27842196 (-) | False | kif13ba |
| XM_034308294.1 | mRNA | upstream | 6692 | 27794420 ~ 27842195 (-) | False | kif13ba |
| XM_034308292.1 | mRNA | upstream | 6692 | 27794420 ~ 27842195 (-) | True | kif13ba |
| XM_034308367.1 | mRNA | upstream | 95271 | 27882999 ~ 27892310 (-) | True | znf395a |
| XM_034307731.1 | mRNA | upstream | 111754 | 27899482 ~ 27910847 (-) | False | si:ch73-204p21.2 |
| TU203284 | other | downstream | 2204795 | 25578939 ~ 25582527 (-) | True | G171734 |
| TU203074 | other | downstream | 2527960 | 25258839 ~ 25259362 (-) | True | G171569 |
| TU203072 | other | downstream | 2528113 | 25258839 ~ 25259209 (-) | False | G171569 |
| TU202681 | other | downstream | 2980227 | 24801083 ~ 24807095 (-) | False | G171256 |
| TU201673 | other | downstream | 4923555 | 22855494 ~ 22863767 (-) | True | G170435 |
| TU204658 | other | upstream | 111763 | 27899491 ~ 27910890 (-) | True | si:ch73-204p21.2 |
| TU204659 | other | upstream | 111763 | 27899491 ~ 27910890 (-) | False | si:ch73-204p21.2 |
| TU204662 | other | upstream | 124509 | 27912237 ~ 27912544 (-) | True | G172919 |
| TU205159 | other | upstream | 1049164 | 28836892 ~ 29050026 (-) | True | G173287 |
| XR_004578919.1 | other | upstream | 1113176 | 28900904 ~ 28908552 (-) | False | stmn4l |
