Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026926144.2 |
| length | 1140 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | pacrg |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 24629095 ~ 24767416 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU202512 | lncRNA | upstream | 137886 | 24485328 ~ 24491209 (+) | True | G171121 |
| TU202508 | lncRNA | upstream | 146241 | 24479901 ~ 24482854 (+) | False | kdm1a |
| TU202527 | lncRNA | upstream | 179028 | 24445603 ~ 24450067 (+) | True | G171135 |
| TU202378 | lncRNA | upstream | 311029 | 24317534 ~ 24318066 (+) | True | G171021 |
| TU202376 | lncRNA | upstream | 319129 | 24309630 ~ 24309966 (+) | True | G171019 |
| TU202793 | lncRNA | downstream | 305330 | 25072746 ~ 25075489 (+) | False | G171352 |
| TU202796 | lncRNA | downstream | 305330 | 25072746 ~ 25075489 (+) | False | G171352 |
| TU202805 | lncRNA | downstream | 305330 | 25072746 ~ 25075000 (+) | True | G171352 |
| TU202792 | lncRNA | downstream | 305862 | 25073278 ~ 25074042 (+) | False | G171352 |
| TU202798 | lncRNA | downstream | 305862 | 25073278 ~ 25075000 (+) | False | G171352 |
| XM_026926072.2 | mRNA | upstream | 67817 | 24554583 ~ 24561278 (+) | True | ptafr |
| XM_026926463.2 | mRNA | upstream | 146519 | 24463547 ~ 24482576 (+) | True | kdm1a |
| XM_026926464.2 | mRNA | upstream | 147481 | 24463466 ~ 24481614 (+) | False | kdm1a |
| XM_034308132.1 | mRNA | upstream | 147481 | 24463545 ~ 24481614 (+) | False | kdm1a |
| XM_034308133.1 | mRNA | upstream | 147481 | 24463546 ~ 24481614 (+) | False | kdm1a |
| XM_026926619.2 | mRNA | downstream | 15587 | 24783003 ~ 24861032 (+) | True | qkia |
| XM_026926448.2 | mRNA | downstream | 227129 | 24994545 ~ 25000619 (+) | True | cx28.6 |
| XM_026926027.2 | mRNA | downstream | 280254 | 25047670 ~ 25055250 (+) | True | rtraf |
| XM_026926373.2 | mRNA | downstream | 347361 | 25114777 ~ 25132890 (+) | True | ptger2a |
| XM_034308043.1 | mRNA | downstream | 404129 | 25171545 ~ 25173314 (+) | True | LOC117598271 |
| trnar-acg_3 | other | upstream | 199433 | 24429590 ~ 24429662 (+) | True | trnar-acg_3 |
| trnah-gug_13 | other | upstream | 199620 | 24429404 ~ 24429475 (+) | True | trnah-gug_13 |
| trnae-uuc_2 | other | upstream | 200844 | 24428180 ~ 24428251 (+) | True | trnae-uuc_2 |
| trnar-acg_2 | other | upstream | 202068 | 24426955 ~ 24427027 (+) | True | trnar-acg_2 |
| trnah-gug_12 | other | upstream | 202255 | 24426769 ~ 24426840 (+) | True | trnah-gug_12 |
| TU202761 | other | downstream | 227077 | 24994493 ~ 25000049 (+) | False | cx28.6 |
| TU202767 | other | downstream | 236567 | 25003983 ~ 25007766 (+) | True | G171329 |
| TU202922 | other | downstream | 408960 | 25176376 ~ 25176832 (+) | False | LOC117598238 |
| TU202966 | other | downstream | 548144 | 25315560 ~ 25318261 (+) | False | samd4a |
| trnat-ugu_12 | other | downstream | 2147942 | 26915358 ~ 26915430 (+) | True | trnat-ugu_12 |
