RNA id: TCONS_00007664


Basic Information

Item Value
RNA id TCONS_00007664
length 297
RNA type misc_RNA
GC content 0.58
exon number 1
gene id XLOC_004019
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 12691395 ~ 12691691 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCCGGGTTCAGTGGCGCGCGCCTGTAATCCAAGCTACTGGGAGGCTGAGGCTGCGGatcgcttgagctcagggcttctggACTGCAGTGGACTATGTTGATCGGGTGTCCGCGTTAAGTTCGGTATCGATATGGTGCTCCTGGGGGAGCTTGGGACCACCAGGTCGTGTAATGAGGGGTGAACCGGCCCAGGTTGGTGACGGAGCAGGTCAAATCCCCCGTGCTGATCAGTAGTGGGATCACACCTGAGAATAGACACTGCAGTGCAGCCTGAGtgacacagagagacgcagacttT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000186519

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008772 lncRNA downstream 200116 12429383 ~ 12491279 (-) True XLOC_003997
TCONS_00008773 lncRNA downstream 225986 12430155 ~ 12465409 (-) True XLOC_003998
TCONS_00008774 lncRNA downstream 226909 12463700 ~ 12464486 (-) True XLOC_004002
TCONS_00008771 lncRNA downstream 261286 12429383 ~ 12430109 (-) False XLOC_003997
TCONS_00007602 lncRNA downstream 471426 12218106 ~ 12219969 (-) False XLOC_003978
TCONS_00007671 lncRNA upstream 42440 12734131 ~ 12741136 (-) False XLOC_004023
TCONS_00007672 lncRNA upstream 47485 12739176 ~ 12741136 (-) True XLOC_004023
TCONS_00007692 lncRNA upstream 1106762 13798453 ~ 13800802 (-) False XLOC_004032
TCONS_00008775 lncRNA upstream 1106801 13798492 ~ 13800113 (-) False XLOC_004032
TCONS_00007693 lncRNA upstream 1107985 13799676 ~ 13800802 (-) True XLOC_004032
TCONS_00007662 mRNA downstream 856 12688642 ~ 12690539 (-) False XLOC_004018
TCONS_00007663 mRNA downstream 1002 12689047 ~ 12690393 (-) True XLOC_004018
TCONS_00007661 mRNA downstream 17758 12672330 ~ 12673637 (-) True XLOC_004017
TCONS_00007659 mRNA downstream 57378 12632395 ~ 12634017 (-) False XLOC_004016
TCONS_00007660 mRNA downstream 57378 12632705 ~ 12634017 (-) True XLOC_004016
TCONS_00007665 mRNA upstream 11832 12703523 ~ 12739532 (-) True XLOC_004020
TCONS_00007666 mRNA upstream 12196 12703887 ~ 12705754 (-) False XLOC_004021
TCONS_00007667 mRNA upstream 12605 12704296 ~ 12705608 (-) True XLOC_004021
TCONS_00007668 mRNA upstream 23373 12715064 ~ 12717004 (-) True XLOC_004022
TCONS_00007669 mRNA upstream 40556 12732247 ~ 12744082 (-) False XLOC_004023
TCONS_00007658 other downstream 69628 12621518 ~ 12621767 (-) True XLOC_004015
TCONS_00007656 other downstream 100099 12590999 ~ 12591296 (-) True XLOC_004013
TCONS_00007648 other downstream 178133 12512966 ~ 12513262 (-) True XLOC_004008
TCONS_00007645 other downstream 191133 12499966 ~ 12500262 (-) True XLOC_004006
TCONS_00007634 other downstream 253015 12438084 ~ 12438380 (-) True XLOC_004000
TCONS_00007673 other upstream 64452 12756143 ~ 12756275 (-) True XLOC_004024
TCONS_00007689 other upstream 790980 13482671 ~ 13482787 (-) True XLOC_004029
TCONS_00007741 other upstream 3326192 16017883 ~ 16019615 (-) False XLOC_004058
TCONS_00007744 other upstream 3329238 16020929 ~ 16021471 (-) True XLOC_004058
TCONS_00007745 other upstream 3366500 16058191 ~ 16058307 (-) True XLOC_004059

Expression Profile

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