Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026933734.2 |
| length | 1274 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 9 |
| gene id | mbip |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 16479179 ~ 16491045 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K24538 | MBIP; MAP3K12-binding inhibitory protein 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU197311 | lncRNA | downstream | 33174 | 16444841 ~ 16446005 (-) | True | G166633 |
| TU197138 | lncRNA | downstream | 211664 | 16267229 ~ 16267515 (-) | True | G166484 |
| TU197027 | lncRNA | downstream | 478667 | 16000219 ~ 16000512 (-) | True | G166390 |
| TU197013 | lncRNA | downstream | 545742 | 15933157 ~ 15933437 (-) | True | G166380 |
| TU196943 | lncRNA | downstream | 582609 | 15895667 ~ 15896570 (-) | True | G166319 |
| TU197551 | lncRNA | upstream | 253561 | 16744606 ~ 16744822 (-) | True | G166865 |
| TU197619 | lncRNA | upstream | 348036 | 16839081 ~ 16861229 (-) | False | LOC113538645 |
| XR_004578933.1 | lncRNA | upstream | 349389 | 16840434 ~ 16860820 (-) | False | LOC113538645 |
| TU197613 | lncRNA | upstream | 369793 | 16860838 ~ 16865427 (-) | True | LOC113538645 |
| TU197616 | lncRNA | upstream | 369793 | 16860838 ~ 16865427 (-) | False | LOC113538645 |
| XM_026934342.2 | mRNA | downstream | 58394 | 16409811 ~ 16420785 (-) | True | cdan1 |
| XM_034307994.1 | mRNA | downstream | 71037 | 16379857 ~ 16408142 (-) | False | stard9 |
| XM_034307993.1 | mRNA | downstream | 71037 | 16379857 ~ 16408142 (-) | True | stard9 |
| XM_026933774.2 | mRNA | downstream | 113919 | 16339196 ~ 16365260 (-) | False | sptb |
| XM_026933775.2 | mRNA | downstream | 118189 | 16337712 ~ 16360990 (-) | True | sptb |
| XM_026934315.2 | mRNA | upstream | 14848 | 16505893 ~ 16508515 (-) | True | nkx2.1 |
| XM_026934511.2 | mRNA | upstream | 22190 | 16513235 ~ 16515180 (-) | True | nkx2.9 |
| XM_026934100.2 | mRNA | upstream | 49795 | 16540840 ~ 16620401 (-) | True | slc25a21 |
| XM_026934101.2 | mRNA | upstream | 51726 | 16542771 ~ 16620401 (-) | False | slc25a21 |
| XM_026934098.2 | mRNA | upstream | 51726 | 16542771 ~ 16620401 (-) | False | slc25a21 |
| XR_003403899.1 | other | downstream | 462695 | 16016352 ~ 16016484 (-) | True | LOC113539022 |
| XR_003403876.2 | other | downstream | 716461 | 15720457 ~ 15762718 (-) | False | eml5 |
| XR_003403862.2 | other | downstream | 815684 | 15635086 ~ 15663495 (-) | False | ktn1 |
| XR_003403861.2 | other | downstream | 815684 | 15635086 ~ 15663495 (-) | False | ktn1 |
| TU196803 | other | downstream | 1157175 | 15304623 ~ 15322004 (-) | False | pgfb |
| XR_004578948.1 | other | upstream | 754894 | 17245939 ~ 17247819 (-) | False | htr1b |
| XR_004578949.1 | other | upstream | 754894 | 17245939 ~ 17247157 (-) | False | htr1b |
| TU198371 | other | upstream | 1814698 | 18305743 ~ 18316207 (-) | True | G167566 |
| TU198372 | other | upstream | 1814698 | 18305743 ~ 18316207 (-) | False | G167566 |
| TU198375 | other | upstream | 1887852 | 18378897 ~ 18382455 (-) | False | gdf7 |
