RNA id: TCONS_00007668


Basic Information

Item Value
RNA id TCONS_00007668
length 984
RNA type mRNA
GC content 0.51
exon number 6
gene id XLOC_004022
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 12715064 ~ 12717004 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTCATTGGCATCTGATCTCGGCGTCCTTCGTGGCAACTGATTCCCagattattgatattattgattGTTGGATACATCGATTGATCGTCTGCTTCTCCCATCATTCAGGTTTGACCCTTGTTATCACACTGTGGTTTGTATTCAGTATGTCTTGTGTTCATTACAGGTTTCAGAGTCGACTCACCTACGACTCGCTCCAGTTTGAGGGCCTCAACATCACTGTGGGAGAGCTGAAGCGGCAGATCATGAGGCGCGAGAGGCTGAAGTTCTGCCAGCTGAAGATCAGCAAAGCCCAAACTGATGAAGaataCACAGATGATGATGCTCTCATCCCCAAAAACACGTCGGTCATCATCAGACGGGTCCCTGCGGCTGGACTGAAGTCCACCAACAGAAGATTTGTTGGacatcaagctGGACCATCAGCCAAATCTTCTCAAACAGGTGATTCTTCACTCCTCTCACTGGAGCAGCTGTTGAAGactgagaatctggctgaggcaaaggcatcagaggaggacaagctaaaagcggtgatgtaccagtccagtctgtgctactactccagcagggcagcagctctgctccGCATAAGCGCATCCggaggagcacagggattccCCGCAGCTTCCTGTTGGAGGTGGACGACCCAAACCGAAAGGGAGTCATGATGGACGGCAGCGGCAAATACGTCATTCCCATCATAGACGCTGAGGCCTATGCTGCTGAGAAGAAAAAGAGGCCGTCCTTCTCCTGCCAGACCAAGCCgctgccctcctcttcctcagcCGGTGCAGCATCTTCAGTCCAGGATGCCGGAGGGAAACGTTCCCGCTCCCCATCACCACCAGAGACGCACGGCGACCAGAAGAGACCACGTCACTGAGAGACCTTCACCCAAGAGACCTGGAGCCGACGTGAGCACagtgtatatattgtacatagtttatgaataaaactgaataaagattATAGCAGCATAAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000122020

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008772 lncRNA downstream 223785 12429383 ~ 12491279 (-) True XLOC_003997
TCONS_00008773 lncRNA downstream 249655 12430155 ~ 12465409 (-) True XLOC_003998
TCONS_00008774 lncRNA downstream 250578 12463700 ~ 12464486 (-) True XLOC_004002
TCONS_00008771 lncRNA downstream 284955 12429383 ~ 12430109 (-) False XLOC_003997
TCONS_00007602 lncRNA downstream 495095 12218106 ~ 12219969 (-) False XLOC_003978
TCONS_00007671 lncRNA upstream 17127 12734131 ~ 12741136 (-) False XLOC_004023
TCONS_00007672 lncRNA upstream 22172 12739176 ~ 12741136 (-) True XLOC_004023
TCONS_00007692 lncRNA upstream 1081449 13798453 ~ 13800802 (-) False XLOC_004032
TCONS_00008775 lncRNA upstream 1081488 13798492 ~ 13800113 (-) False XLOC_004032
TCONS_00007693 lncRNA upstream 1082672 13799676 ~ 13800802 (-) True XLOC_004032
TCONS_00007666 mRNA downstream 9310 12703887 ~ 12705754 (-) False XLOC_004021
TCONS_00007667 mRNA downstream 9456 12704296 ~ 12705608 (-) True XLOC_004021
TCONS_00007662 mRNA downstream 24525 12688642 ~ 12690539 (-) False XLOC_004018
TCONS_00007663 mRNA downstream 24671 12689047 ~ 12690393 (-) True XLOC_004018
TCONS_00007661 mRNA downstream 41427 12672330 ~ 12673637 (-) True XLOC_004017
TCONS_00007669 mRNA upstream 15243 12732247 ~ 12744082 (-) False XLOC_004023
TCONS_00007670 mRNA upstream 16310 12733314 ~ 12743808 (-) False XLOC_004023
TCONS_00007674 mRNA upstream 65292 12782296 ~ 12802123 (-) False XLOC_004025
TCONS_00007675 mRNA upstream 68322 12785326 ~ 12800945 (-) False XLOC_004025
TCONS_00007676 mRNA upstream 68322 12785326 ~ 12801157 (-) True XLOC_004025
TCONS_00007664 other downstream 23373 12691395 ~ 12691691 (-) True XLOC_004019
TCONS_00007658 other downstream 93297 12621518 ~ 12621767 (-) True XLOC_004015
TCONS_00007656 other downstream 123768 12590999 ~ 12591296 (-) True XLOC_004013
TCONS_00007648 other downstream 201802 12512966 ~ 12513262 (-) True XLOC_004008
TCONS_00007645 other downstream 214802 12499966 ~ 12500262 (-) True XLOC_004006
TCONS_00007673 other upstream 39139 12756143 ~ 12756275 (-) True XLOC_004024
TCONS_00007689 other upstream 765667 13482671 ~ 13482787 (-) True XLOC_004029
TCONS_00007741 other upstream 3300879 16017883 ~ 16019615 (-) False XLOC_004058
TCONS_00007744 other upstream 3303925 16020929 ~ 16021471 (-) True XLOC_004058
TCONS_00007745 other upstream 3341187 16058191 ~ 16058307 (-) True XLOC_004059

Expression Profile

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