Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034308045.1 |
| length | 1185 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 1 |
| gene id | LOC117598273 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047604.1 |
| NCBI id | CM018550.1 |
| chromosome length | 29376037 |
| location | 25533476 ~ 25534660 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU203274 | lncRNA | downstream | 23856 | 25504388 ~ 25509620 (-) | True | G171726 |
| TU203256 | lncRNA | downstream | 63402 | 25469504 ~ 25470074 (-) | True | G171710 |
| TU203103 | lncRNA | downstream | 143605 | 25389583 ~ 25389871 (-) | True | G171594 |
| TU203079 | lncRNA | downstream | 241538 | 25291426 ~ 25291938 (-) | True | G171573 |
| TU203076 | lncRNA | downstream | 243974 | 25287152 ~ 25289502 (-) | True | G171570 |
| TU203311 | lncRNA | upstream | 238844 | 25773504 ~ 25778966 (-) | True | G171755 |
| TU203430 | lncRNA | upstream | 443136 | 25977796 ~ 25978027 (-) | True | G171864 |
| TU203440 | lncRNA | upstream | 523585 | 26058245 ~ 26058509 (-) | True | G171874 |
| TU203600 | lncRNA | upstream | 1060621 | 26595281 ~ 26595483 (-) | True | G172016 |
| TU203802 | lncRNA | upstream | 1237472 | 26772132 ~ 26773050 (-) | True | G172196 |
| XM_034307815.1 | mRNA | downstream | 64907 | 25431323 ~ 25468569 (-) | True | zgc:85722 |
| XM_026926044.2 | mRNA | downstream | 64907 | 25431325 ~ 25468569 (-) | False | zgc:85722 |
| XM_026926794.2 | mRNA | downstream | 115013 | 25398090 ~ 25418463 (-) | True | ros1 |
| XM_026926796.2 | mRNA | downstream | 115013 | 25399901 ~ 25418463 (-) | False | ros1 |
| XM_026926797.2 | mRNA | downstream | 136729 | 25389931 ~ 25396747 (-) | True | styx |
| XM_034307899.1 | mRNA | upstream | 72 | 25534732 ~ 25555563 (-) | True | LOC113534087 |
| XM_026926010.2 | mRNA | upstream | 22749 | 25557409 ~ 25574121 (-) | True | fyna |
| XM_026926529.2 | mRNA | upstream | 52828 | 25587488 ~ 25592743 (-) | True | col10a1a |
| XM_026926867.2 | mRNA | upstream | 85356 | 25620016 ~ 25633883 (-) | True | si:ch211-266g18.9 |
| XM_026926059.2 | mRNA | upstream | 100067 | 25634727 ~ 25640221 (-) | True | fhl5 |
| TU203074 | other | downstream | 274114 | 25258839 ~ 25259362 (-) | True | G171569 |
| TU203072 | other | downstream | 274267 | 25258839 ~ 25259209 (-) | False | G171569 |
| TU202681 | other | downstream | 726381 | 24801083 ~ 24807095 (-) | False | G171256 |
| TU201673 | other | downstream | 2669709 | 22855494 ~ 22863767 (-) | True | G170435 |
| TU201211 | other | downstream | 3417600 | 22115565 ~ 22115876 (-) | True | G170023 |
| TU203284 | other | upstream | 44279 | 25578939 ~ 25582527 (-) | True | G171734 |
| TU204658 | other | upstream | 2364831 | 27899491 ~ 27910890 (-) | True | si:ch73-204p21.2 |
| TU204659 | other | upstream | 2364831 | 27899491 ~ 27910890 (-) | False | si:ch73-204p21.2 |
| TU204662 | other | upstream | 2377577 | 27912237 ~ 27912544 (-) | True | G172919 |
| TU205159 | other | upstream | 3302232 | 28836892 ~ 29050026 (-) | True | G173287 |
